2024

Gas-sensing riboceptors (2024) Anbalagan Savani
RNA Biology 21(1) s. 1-6 DOI:10.1080/15476286.2024.2379607 F=3,6

CNPY2 protects against ER stress and is expressed by corticostriatal neurons together with CTIP2 in a mouse model of Huntington’s disease (2024) Scordino Miriana, Stepanova Polina, Srinivasan Vignesh, Pham Dan Duc, Eriksson Ove, Łałowski Maciej, Mudò Giuseppa, Di Liberto Valentina, Korhonen Laura, Voutilainen Merja H., Lindholm Dan
Frontiers in Molecular Neuroscience 17, 1473058 DOI:10.3389/fnmol.2024.1473058 F=3,5

Artificial intelligence in drug discovery: A mirage or an oasis? (2024) Sethi Aaftaab, Rathi Brijesh
Drug Discovery Today 29( 6), 103994 DOI: 10.1016/j.drudis.2024.103994 F=6,5

Identification of pathogenic-specific open reading frames in staphylococci species (2024) Farhan Fatima Naser, Zieleziński Andrzej, Karłowski Wojciech Maciej
F1000Research 13 s. 27 DOI:10.12688/f1000research.142429.1 F=3,2

Effects of Atorvastatin and Simvastatin on the Bioenergetic Function of Isolated Rat Brain Mitochondria (2024) Wojcicki Krzysztof, Budzinska Adrianna, Jarmuszkiewicz Wiesława
International Journal of Molecular Sciences 25(15), 8494 DOI:10.3390/ijms25158494 F=4,9

Arabidopsis HECT and RING-type E3 Ligase Promote MAPKKK18 Degradation To Regulate Abscisic Acid Signalling (2024) Tajdel-Zielińska Małgorzata, Janicki Maciej, Ludwików Agnieszka
Plant and Cell Physiology 65(3) s. 390–404 DOI: 10.1093/pcp/pcad165 F=3,9

The unique monoclonal antibodies and immunochemical assay for comprehensive determination of the cell-bound and soluble HER2 in different biological samples (2024) Antos Aleksandra, Topolska-Woś Agnieszka, Woś Marcin, Mitura Agata, Sarzyńska Paulina, Lipiński Tomasz, Kurylcio Andrzej, Ziółkowski Piotr, Świtalska Marta, Tkaczuk-Włach Joanna, Gamian Andrzej, Polkowski Wojciech P., Staniszewska Magdalena
Scientific Reports 14(1) s. 1-14 DOI:10.1038/s41598-024-54590-z F=3,8

Oxygen is an essential gasotransmitter directly sensed via protein gasoreceptors (2024) Anbalagan Savani
Animal Models and Experimental Medicine 7(2) s. 189-193 DOI:10.1002/ame2.12400 F=3,8

Incorporating Prior Knowledge in the Seeds of Adaptive Sampling Molecular Dynamics Simulations of Ligand Transport in Enzymes with Buried Active Sites (2024) Sarkar Dheeraj, Surpeta Bartłomiej, Brezovsky Jan
Journal of Chemical Theory and Computation 20(14) s. 5807-5819 DOI10.1021/acs.jctc.4c00452 F=5,7

Comparative analysis of SPL transcription factors from streptophyte algae and embryophytes reveals evolutionary trajectories of SPL family in streptophytes (2024) Alisha Alisha, Szweykowska-Kulińska Zofia, Sierocka Izabela
Scientific Reports 14(1), 1611 DOI:10.1038/s41598-024-51626-2 F=3,8

Imprinted small nucleolar RNAs: Missing link in development and disease? (2024) Gawade Kishor, Raczyńska Katarzyna Dorota
Wiley Interdisciplinary Reviews-RNA 15:e1818 DOI:10.1002/wrna.1818 F=6,4

Mitochondria in COVID-19: from cellular and molecular perspective (2024) Rurek Michał Stanisław
Frontiers in Physiology 15, 1406635 DOI:10.3389/fphys.2024.1406635 F=3,2

Water will Find Its Way: Transport through Narrow Tunnels in Hydrolases (2024) Sequeiros Borja Carlos Eduardo, Surpeta Bartłomiej, Thirunavukarasu Aravind, Dongmo Foumthuim Cedrix J., Marchlewski Igor, Brezovsky Jan
Journal of Chemical Information and Modeling 64(15) s. 6014–6025 DOI:10.1021/acs.jcim.4c00094 F=5,6

Temperature-sensing riboceptors (2024) Anbalagan Savani
RNA Biology 21(1) s. 1-6 DOI:10.1080/15476286.2024.2379118 F=3,6

Functional and regulatory diversity of homeobox-leucine zipper transcription factors BnaHB6 under dehydration and salt stress in Brassica napus L. (2024) Żyła Natalia, Cieśla Agata, Szała Laurencja, Babula-Skowrońska Danuta
Plant Molecular Biology 114(3), 59 DOI:10.1007/s11103-024-01465-6 F=3,9

Seasonal dynamics of cell-to-cell transport in angiosperm wood (2024) Słupianek Aleksandra, Myśkow Elżbieta, Kasprowicz-Maluśki Anna, Dolzblasz Alicja, Żytkowiak Roma, Turzańska Magdalena, Sokołowska Katarzyna
Journal of Experimental Botany 75(5) s. 1331-1346 DOI:10.1093/jxb/erad469 F=5,6

Reinforcing Tunnel Network Exploration in Proteins Using Gaussian Accelerated Molecular Dynamics (2024) Mandal Nishita, Surpeta Bartłomiej, Brezovsky Jan
Journal of Chemical Information and Modeling 64(16) s. 6623-6635 DOI:10.1021/acs.jcim.4c00966 F=5,6

MBNL splicing factors regulate the microtranscriptome of skeletal muscles (2024) Piasecka Agnieszka, Szcześniak Michał, Sekrecki Michał, Kajdasz Arkadiusz, Sznajder Łukasz, Baud Anna Honorata, Sobczak Krzysztof
Nucleic Acids Research gkae774 DOI:10.1093/nar/gkae774 F=16,6

Ultraconserved bacteriophage genome sequence identified in 1300-year-old human palaeofaeces (2024) Rozwalak Piotr, Barylski Jakub, Wijesekara Yasas, Dutilh Bas E., Zieleziński Andrzej
Nature Communications 15(1):495 DOI:10.1038/s41467-023-44370-0 F=14,7

Structural, topological, and functional characterization of transmembrane proteins TMEM213, 207, 116, 72 and 30B provides a potential link to ccRCC etiology (2024) Wesoły Joanna Zofia, Pstrąg Natalia, Derylo Kamil, Michalec-Wawiórka Barbara, Derebecka Natalia, Nowicka Hanna, Kajdasz Arkadiusz, Kluzek Katarzyna, Srebniak Małgorzata, Tchórzewski Marek, Kwias Zbigniew, Bluyssen Hans
American Journal of Cancer Research 14(5):2665 DOI:10.62347/CRED7532 F=3,6

Coenzyme Q deficiency in endothelial mitochondria caused by hypoxia; remodeling of the respiratory chain and sensitivity to anoxia/reoxygenation (2024) Dominiak Karolina, Gałgański Łukasz, Budzińska Adrianna Justyna, Jarmuszkiewicz Wiesława
Free Radical Biology and Medicine 214 s. 158-170 DOI:10.1016/j.freeradbiomed.2024.02.005 F=7,1

MiRNAs differentially expressed in vegetative and reproductive organs of Marchantia polymorpha – insights into their expression pattern, gene structures and function (2024) Aggarwal Bharti, Karłowski Wojciech Maciej, Nuc Przemysław, Jarmołowski Artur, Szweykowska-Kulińska Zofia, Pietrykowska Halina
RNA Biology 21(1) s. 1-12 DOI:10.1080/15476286.2024.2303555 F=3,6

Novel function of U7 snRNA in the repression of HERV1/LTR12s and lincRNAs in human cells (2024) Plewka Patrycja, Szcześniak Michał, Stępień Agata Katarzyna, Pasieka Robert, Wanowska Elżbieta, Makałowska Izabela, Raczyńska Katarzyna Dorota
Nucleic Acids Research gkae738 DOI:10.1093/nar/gkae738 F=16,6

Recovery from anhydrobiosis in the tardigrade Paramacrobiotus experimentalis: Better to be young than old and in a group than alone (2024) Nagwani Amit, Melosik Iwona, Kaczmarek Łukasz, Kmita Hanna
Heliyon 10(5):e26807 DOI: 10.1016/j.heliyon.2024.e26807 F=3,4

Quantification of Circulating Cell-Free DNA in Idiopathic Parkinson’s Disease Patients (2024) Wojtkowska Małgorzata, Karczewska Natalia, Pacewicz Klaudia, Pacak Andrzej, Kopeć Piotr, Florczak-Wyspiańska Jolanta, Popławska-Domaszewicz Karolina, Małkiewicz Tomasz, Sokół Bartosz
International Journal of Molecular Sciences 25(5) s. 2818 DOI:10.3390/ijms25052818 F=4,9

Tardigrade proteins: molecular tools in the phenomenon of anhydrobiosis (2024) Krakowiak Michalina Nadia, Bartylak Tomasz, Kmita Hanna, Kaczmarek Łukasz, Nawrot Robert
Zoological Journal of the Linnean Society 200(1) s.269-281 DOI:10.1093/zoolinnean/zlad066 F=3,0

In vitro anticancer activity of melanin-like nanoparticles for multimodal therapy of glioblastoma (2024) Żebrowska Klaudia, Grabowska Małgorzata, Coy Romero Luis Emerson, Rolle Katarzyna Monika, Mrówczyński Radosław, Grześkowiak Bartosz
Nanotechnology Reviews 13, 20230206 DOI:10.1515/ntrev-2023-0206 F=6,1

2023

Plant dehydrins and dehydrin-like proteins: characterization and participation in abiotic stress response (2023) Szlachtowska Zofia, Rurek Michał Stanisław
Frontiers in Plant Science 14, 1213188 DOI:10.3389/fpls.2023.1213188 IF=4,1

Potential oxidative stress related targets of mitochondria-focused therapy of PTSD (2023) Kmita Hanna, Pinna Graziano, Lushchak Volodymyr I.
Frontiers in Physiology 14, 1266575 DOI:10.3389/fphys.2023.1266575 IF=3,2

Altered acylcarnitine metabolism and inflexible mitochondrial fuel utilization characterize the loss of neonatal myocardial regeneration capacity (2023) Kankuri E., Finckenberg P., Leinonen J., Tarkia M., Björk S., Purhonen J., Kallijärvi J., Kankainen M., Soliymani R., Łałowski Maciej, Mervaala E.
Experimental and Molecular Medicine 55(4) s. 806-817 DOI:10.1038/s12276-023-00967-5 IF=9,5

A genotype–phenotype correlation in split-hand/foot malformation type 1: further refinement of the phenotypic subregions within the 7q21.3 locus (2023) Sowińska-Seidler Anna, Socha Magdalena, Szoszkiewicz Anna, Materna-Kiryluk Anna, Jamsheer Aleksander
Frontiers in Molecular Biosciences 10, 1250714 DOI:10.3389/fmolb.2023.1250714 IF=3,9

Taxonomically Restricted Genes in Bacillus may Form Clusters of Homologs and Can be Traced to a Large Reservoir of Noncoding Sequences (2023) Karłowski Wojciech Maciej, Varshney Deepti, Zieleziński Andrzej
Genome Biology and Evolution 15(3) s. 1-16 DOI:10.1093/gbe/evad023 IF=3,2

AGouTI–Flexible Annotation of Genomic and Transcriptomic Intervals (2023) Kosiński Jan G., Żywicki Marek
PLoS Computational Biology 19(10) e1011527 DOI:10.1371/journal.pcbi.1011527 IF=3,8

Molecular Re-Diagnosis with Whole-Exome Sequencing Increases the Diagnostic Yield in Patients with Non-Syndromic Retinitis Pigmentosa (2023) Wawrocka Anna, Socha Magdalena, Walczak-Sztulpa Joanna, Koczyk Grzegorz, Skorczyk-Werner Anna, Krawczyński Maciej R.
Diagnostics, MDPI 13(4) 730 DOI:10.3390/diagnostics13040730 IF=3

Anti-inflammatory and antioxidative effects of elderberry diet in the rat model of seizure: a behavioral and histological investigation on the hippocampus (2023) Bayat Amir-Hossein, Eskandari Neda, Sani Mojtaba, Fotouhi Farid, Shenasandeh Zahra, Saeidikhoo Sara, Rohani Razieh, Sabbagh Alvani Mohammadamin, Mafi Balani Mohammadreza, Eskandarian Boroujeni Mahdi, Abdollahifar Mohammad-Amin, Tajari Faezeh, Aliaghaei Abbas, Hassani Moghaddam Meysam
Toxicology Research 12(5) s. 783-795 DOI:10.1093/toxres/tfad070 IF=2,2

VDAC as a Cellular Hub: Docking Molecules and Interactions (2023) Kmita Hanna, Messina Angela Anna, De Pinto Vito
International Journal of Molecular Sciences 24(7) 6649 DOI:10.3390/ijms24076649 IF=4,9

TRGdb: a universal resource for the exploration of taxonomically restricted genes in bacteria (2023) Zieleziński Andrzej, Dobrychlop Wojciech, Karłowski Wojciech Maciej
Database-The Journal of Biological Databases and Curation 2023 s. 1-6, DOI:10.1093/database/baad058 IF=3,4

“Blindmen and an elephant”: The need for animals in research, drug safety studies, and understanding civilizational diseases (2023) Anbalagan Savani
Animal Models and Experimental Medicine 6(6) s. 627-633, DOI:10.1002/ame2.12364 IF=3,8

Carbon dioxide and MAPK signalling: towards therapy for inflammation (2023) Gałgańska Hanna, Jarmuszkiewicz Wiesława, Gałgański Łukasz
Cell Communication and Signaling 21(1) 280 DOI:10.1186/s12964-023-01306-x IF=8,2

Restriction of access to the central cavity is a major contributor to substrate selectivity in plant ABCG transporters (2023) Pakuła Konrad, Sequeiros Borja Carlos Eduardo, Biała-Leonhard Wanda, Pawela Aleksandra, Banasiak Joanna, Bailly Aurélien, Radom Marcin, Geisler Markus, Brezovsky Jan, Jasiński Michał
Cellular and Molecular Life Sciences 80(4) 105 DOI:10.1007/s00018-023-04751-6 IF=6,2

Minocycline treatment improves cognitive and functional plasticity in a preclinical mouse model of major depressive disorder (2023) Poggini Silvia, Banqueri Maria, Albanese Naomi Ciano, Golia Maria Teresa, Ibá?ez Fernando González, Limatola Cristina, Furhmann Martin, Łałowski Maciej, Tremblay Marie-Eve, Maggi Laura, Kaminska Bozena, Branchi Igor
Behavioural Brain Research 441, 114295 DOI:10.1016/j.bbr.2023.114295 IF=2,6

Relacja z konferencji: VI Ogólnopolska Konferencja „BIOTECHNOLOGIA NIEJEDNO MA IMIĘ” (2023) Rurek Michał Stanisław, Perła-Kaján Joanna, Pusiak Karolina
Postępy Biochemii 69(4) s. 328 – 331 DOI:10.18388/pb.2021_511 IF=1,7

A pure de novo 16p13.3 duplication and amplification in a patient with femoral hypoplasia, psychomotor retardation, heart defect, and facial dysmorphism—a case report and literature review of the partial 16p13.3 trisomy syndrome (2023) Socha Magdalena, Szoszkiewicz Anna, Simon Dorota, Jamsheer Aleksander
Journal of Applied Genetics 64(1) s. 125-134, DOI:10.1007/s13353-022-00743-7 IF=2

Stress resilience is established during development and is regulated by complement factors (2023) Swaminathan Amrutha, Gliksberg Michael, Anbalagan Savani, Wigoda Noa, Levkowitz Gil
Cell Reports 42(1) 111973 DOI:10.1016/j.celrep.2022.111973 IF=7,5

ARA: a flexible pipeline for automated exploration of NCBI SRA datasets (2023) Maurya Anand, Szymański Maciej, Karłowski Wojciech Maciej
GigaScience 12(1) s. 1-5, DOI:10.1093/gigascience/giad067 IF=11,8

The Evaluation of SHAPE-MaP RNA Structure Probing Protocols Reveals a Novel Role of Mn2+ in the Detection of 2?-OH Adducts (2023) Grzywacz Kamilla, Chełkowska-Pauszek Agnieszka, Plucinska-Jankowska Marianna, Żywicki Marek
International Journal of Molecular Sciences 24(9) 7890 DOI:10.3390/ijms24097890 IF=4,9

Direct and indirect targets of carboxyatractyloside, including overlooked toxicity toward nucleoside diphosphate kinase (NDPK) and mitochondrial H+ leak (2023) Woyda-Płoszczyca Andrzej
Pharmaceutical Biology 61(1) s. 372-390, DOI:10.1080/13880209.2023.2168704 IF=3,9

Nano-structured hydrotrope-caged cytochrome c with boosted stability in harsh environments: a molecular insight (2023) Bharadwaj Pranav, Sarkar Dheeraj, Bisht Meena, Shet Sachin M., Kotrappanavar Nataraj Sanna, Lokesh Veeresh, Franklin Gregory, Brezovsky Jan, Mondal Dibyendu
Green Chemistry 25 s.6666 DOI:10.1039/d3gc01704d IF=9,3

Divide-and-conquer approach to study protein tunnels in long molecular dynamics simulations (2023) Sequeiros Borja Carlos Eduardo, Surpeta Bartłomiej, Marchlewski Igor, Brezovsky Jan
MethodsX 10, 101968 DOI:10.1016/j.mex.2022.101968 IF=1,6

CRISPR-Cas9 F0 knockout approach using predesigned in vitro transcribed guide RNAs partially recapitulates Rx3 function in eye morphogenesis (2023) Wysocka Emilia, Gonicka Agata, Anbalagan Savani
Journal of Genetics 102(1) 5 DOI:10.1007/s12041-022-01408-4 IF=1,4

Why do plants need the ZMM crossover pathway? A snapshot of meiotic recombination from the perspective of interhomolog polymorphism (2023) Ziółkowski Piotr
Plant Reproduction 36, s. 43–54, DOI:10.1007/s00497-022-00446-3 IF=2,9

Editorial: Updates on innate immune responses in hepatic health and disease (2023) Bluyssen Hans, Chatzigeorgiou Antonios
Frontiers in Immunology 14, 1190405 DOI:10.3389/fimmu.2023.1190405 IF=5,7

tRNA-Cys gene clusters exhibit high variability in Arabidopsis thaliana (2023) Szymański Maciej, Maurya Anand, Kopeć Piotr, Karłowski Wojciech Maciej
BMC Plant Biology 23(1) s. 1-12 DOI:10.1186/s12870-023-04632-x IF=4,3

Loss of MYB34 Transcription Factor Supports the Backward Evolution of Indole Glucosinolate Biosynthesis in a Subclade of the Camelineae Tribe and Releases the Feedback Loop in This Pathway in Arabidopsis (2023) Czerniawski Paweł, Piślewska-Bednarek Mariola, Piasecka Anna, Kułak Karolina, Bednarek Paweł
Plant and Cell Physiology 64(1) s.80–93 DOI:10.1093/pcp/pcac142 IF=3,9

Editorial: Role of mitochondria in post-traumatic stress disorder (PTSD) (2023) Pinna Graziano, Kmita Hanna, Lushchak Volodymyr I.
Frontiers in Physiology 14, 1341204 DOI:10.3389/fphys.2023.1341204 IF=3,2

The structure and function of YTHDF epitranscriptomic m6A readers (2023) Sikorski Vilbert, Selberg Simona, Łałowski Maciej, Karelson Mati, Kankuri Esko
Trends in Pharmacological Sciences 44(6) s. 335-353 DOI:10.1016/j.tips.2023.03.004 IF=13,9

Ketogenic diet changes microglial morphology and the hippocampal lipidomic profile differently in stress susceptible versus resistant male mice upon repeated social defeat (2023) González Ibá?ez Fernando, Halvorson Torin, Sharma Kaushik, McKee Chloe Grace, Carrier Micaël, Picard Katherine, Vernoux Nathalie, Bisht Kanchan, Deslauriers Jessica, Łałowski Maciej, Tremblay Marie-?ve
Brain Behavior and Immunity 114, s. 383-406, DOI:10.1016/j.bbi.2023.09.006 IF=8,8

Deep into the niche: Deciphering local endoderm?microenvironment interactions in development, homeostasis, and disease of pancreas and intestine (2023) Szlachcic Wojciech, Letai Katherine C., Scavuzzo Marissa A., Borowiak Małgorzata
BioEssays 45(4) 2200186 DOI:10.1002/bies.202200186 IF=3,2

Seasonal dynamics of cell-to-cell transport in angiosperm wood (2023) Słupianek Aleksandra, Myśkow Elżbieta, Kasprowicz-Maluśki Anna, Dolzblasz Alicja, Żytkowiak Roma, Turzańska Magdalena, Sokołowska Katarzyna
Journal of Experimental Botany 75(5) s. 1331-1346 DOI:10.1093/jxb/erad469 IF=5,6

Fine mapping of meiotic crossovers in Brassica oleracea reveals patterns and variations depending on direction and combination of crosses (2023) Cai Chengcheng, Pele Alexandre, Bucher Johan, Finkers Richard, Bonnema Guusje
Plant Journal 113(6) s. 1192-1210 DOI:10.1111/tpj.16104 IF=6,2

The Role and Activity of SWI/SNF Chromatin Remodelers (2023) Bieluszewski Tomasz, Prakash Sandhan, Roulé Thomas, Wagner Doris
Annual Review of Plant Biology 74, 28 DOI:10.1146/annurev-arplant-102820-093218 IF=21,3

Editorial: Molecular compass to the future – COMPASS 2021 (2023) Ludwików Agnieszka, Cieśla Agata, Pacak Andrzej
Frontiers in Plant Science 14, 1257997 DOI:10.3389/fpls.2023.1257997 IF=4,1

The Bro1-like domain-containing protein, AtBro1, modulates growth and abiotic stress responses in Arabidopsis (2023) Mehdi Syed Muhammad Muntazir, Szcześniak Michał, Ludwików Agnieszka
Frontiers in Plant Science 14, 1157435 DOI:10.3389/fpls.2023.1157435 IF=4,1

A ligand-receptor interactome atlas of the zebrafish (2023) Chodkowski Milosz, Zieleziński Andrzej, Anbalagan Savani
iScience 26(8) 107309 DOI:10.1016/j.isci.2023.107309 IF=4,6

FUS regulates a subset of snoRNA expression and modulates the level of rRNA modifications (2023) Gawade Kishor, Plewka Patrycja, Häfner Sophia J., Lund Anders H., Marchand Virginie, Motorin Yuri, Szcześniak Michał, Raczyńska Katarzyna Dorota
Scientific Reports 13, 2974 DOI:10.1038/s41598-023-30068-2 IF=3,8

Fluorescence in situ Localization of Pri-miRNAs in Isolated Arabidopsis thaliana Nuclei (2023) Gulanicz Tomasz, Zienkiewicz Agnieszka, Zienkiewicz Krzysztof, Kasprowicz-Maluśki Anna, Szweykowska-Kulińska Zofia, Jarmołowski Artur
Bio-protocol 13(18) e4824 DOI:10.21769/bioprotoc.4824 IF=1

Modulatory role of RNA helicases in MBNL-dependent alternative splicing regulation (2023) Taylor Katarzyna, Piasecka Agnieszka, Kajdasz Arkadiusz, Brzęk Aleksandra, Polay Espinoza Micaela, Bourgeois Cyril F., Jankowski Artur, Borowiak Małgorzata, Raczyńska Katarzyna Dorota, Sznajder Łukasz, Sobczak Krzysztof
Cellular and Molecular Life Sciences (80) 335 DOI:10.1007/s00018-023-04927-0 IF=6,2

Biochemical and genetic dissection of the RNA-binding surface of the FinO domain of Escherichia coli ProQ (2023) Stein Ewa, Wang Suxuan, Dailey Katherine G., Gravel Chandra M., Wang Shiying, Olejniczak Mikołaj, Berry Katherine E.
RNA 29(11) s. 1772-1791, DOI:10.1261/rna.079697.123 IF=4,2

Carboranyl-1,8-naphthalimide intercalators induce lysosomal membrane permeabilization and ferroptosis in cancer cell lines (2023) Rykowski Sebastian, Gurda-Woźna Dorota, Fedoruk-Wyszomirska Agnieszka, Orlicka-Płocka Marta, Kowalczyk Aleksandra Ewa, Stączek Paweł, Denel-Bobrowska Marta, Biniek-Antosiak Katarzyna, Rypniewski Wojciech, Wyszko Eliza, Olejniczak Agnieszka B.
Journal of Enzyme Inhibition and Medicinal Chemistry 38(1) s. 1-25 DOI:10.1080/14756366.2023.2171028 IF=5,6

Bacteriophage-encoded 24B_1 molecule resembles herpesviral microRNAs and plays a crucial role in the development of both the virus and its host (2023) Bloch Sylwia, Lewandowska Natalia, Zwolenkiewicz Joanna, Mach Paulina, Łukasiak Aleksandra, Olejniczak Mikołaj, Donaldson Logan W., Węgrzyn Grzegorz, Nejman-Faleńczyk Bożena
PLoS ONE 18(12) e0296038 DOI:10.1371/journal.pone.0296038 IF=2,9

The effect of DNA polymorphisms and natural variation on crossover hotspot activity in Arabidopsis hybrids (2023) Szymańska-Lejman Maja, Dzięgielewski Wojciech, Dłużewska Julia, Kbiri Nadia, Bieluszewska Anna, Poethig R. Scott, Ziółkowski Piotr
Nature Communications 14(1) 33 DOI:10.1038/s41467-022-35722-3 IF=14,7

Acanthamoeba castellanii Uncoupling Protein: A Complete Sequence, Activity, and Role in Response to Oxidative Stress (2023) Antos-Krzemińska Nina Magdalena, Kicińska Anna Małgorzata, Nowak Witold, Jarmuszkiewicz Wiesława
International Journal of Molecular Sciences 24(15) 12501 DOI:10.3390/ijms241512501 IF=4,9

Variations in the enzymatic activity of S1-type nucleases results from differences in their active site structures (2023) Krela Rafał, Poręba Elżbieta, Leśniewicz Krzysztof
Biochimica et Biophysica Acta-General Subjects 1867(10) 130424 DOI:10.1016/j.bbagen.2023.130424 IF=2,8

Role of Long Intergenic Noncoding RNAs in Cancers with an Overview of MicroRNA Binding (2023) Pasieka Robert, Zasoński Gilbert Wojciech, Raczyńska Katarzyna Dorota
Molecular Diagnosis & Therapy 27(1) s. 29-47 DOI: 10.1007/s40291-022-00619-w IF=4,1

Conserved and non-conserved RNA–target modules in plants: lessons for a better understanding of Marchantia development (2023) Pietrykowska Halina, Alisha Alisha, Aggarwal Bharti, Watanabe Yuichiro, Ohtani Misato, Jarmołowski Artur, Sierocka Izabela, Szweykowska-Kulińska Zofia
Plant Molecular Biology 113 s. 121–142 DOI:10.1007/s11103-023-01392-y IF=3,9

The effect of hypomagnetic field on survival and mitochondrial functionality of active Paramacrobiotus experimentalis females and males of different age (2023) Nagwani Amit Kumar, Budka Anna, Łacka Agnieszka, Kaczmarek Łukasz, Kmita Hanna
Frontiers in Physiology 14, 1253483 DOI:10.3389/fphys.2023.1253483 IF=3,2

The bisphosphonates alendronate and zoledronate induce adaptations of aerobic metabolism in permanent human endothelial cells (2023) Budzińska Adrianna Justyna, Gałgański Łukasz, Jarmuszkiewicz Wiesława
Scientific Reports 13(1) 16205 DOI:10.1038/s41598-023-43377-3 IF=3,8

The expanding role of RNA modifications in plant RNA polymerase II transcripts: highlights and perspectives (2023) Zimna Marta Magdalena, Dolata Jakub, Szweykowska-Kulińska Zofia, Jarmołowski Artur
Journal of Experimental Botany 74(14) s. 3975-3986 DOI:10.1093/jxb/erad136 IF=5,6

Structural, topological, and functional characterization of transmembrane proteins TMEM213, 207, 116, 72 and 30B provides a potential link to ccRCC etiology (2023) Wesoły Joanna Zofia, Pstrąg Natalia, Derylo Kamil, Michalec-Wawiórka Barbara, Derebecka Natalia, Nowicka Hanna, Kajdasz Arkadiusz, Kluzek Katarzyna, Srebniak Małgorzata, Tchórzewski Marek, Kwias Zbigniew, Bluyssen Hans
American Journal of Cancer Research 13(5) s. 1863–1883 DOI:10.62347/CRED7532. eCollection 2024. IF=3,6

Mitochondrial Coenzyme Q Redox Homeostasis and Reactive Oxygen Species Production (2023) Jarmuszkiewicz Wiesława, Dominiak Karolina, Budzińska Adrianna Justyna, Wójcicki Krzysztof, Gałgański Łukasz
Frontiers in Bioscience-Landmark 28(3) 61 DOI:10.31083/j.fbl2803061 IF=3,3

FK506-Binding Protein 2 Participates in Proinsulin Folding (2023) Hoefner Carolin, Bryde Tenna Holgersen, Pihl Celina, Tiedemann Sylvia Naiga, Bresson Sophie Emilie, Hotiana Hajira Ahmed, Khilji Muhammad Saad, Santos Theodore Dos, Puglia Michele, Pisano Paola, Majewska Mariola, Durzyńska Julia Łucja, Klindt Kristian, Klusek Justyna, Perone Marcelo J., Bucki Robert, Hägglund Per M?rten, Gourdon Pontus Emanuel, Gotfryd Kamil, Urbaniak Edyta, Borowiak Małgorzata, Wierer Michael, MacDonald Patrick Edward, Mandrup-Poulsen Thomas, Marzec Michal Tomasz
Biomolecules 13(1) 152 DOI:10.3390/biom13010152 IF=4,8

MSH2 stimulates interfering and inhibits non-interfering crossovers in response to genetic polymorphism (2023) Dłużewska Julia, Dzięgielewski Wojciech, Szymańska-Lejman Maja, Gazecka Monika, Henderson Ian R., Higgins James D., Ziółkowski Piotr
Nature Communications 14, 6716 DOI:10.1038/s41467-023-42511-z IF=14,7

Insight into metabolic sensors of nitrosative stress protection in Phytophthora infestans (2023) Gajewska Joanna, Floryszak-Wieczorek Jolanta, Kosmala Arkadiusz, Perlikowski Dawid, Żywicki Marek, Sobieszczuk-Nowicka Ewa Anna, Judelson Howard S., Arasimowicz-Jelonek Magdalena
Frontiers in Plant Science 14, 1148222 DOI:10.3389/fpls.2023.1148222 IF=4,1

High-throughput method for Oxygen Consumption Rate measurement (OCR) in plant mitochondria (2023) Fuchs Hanna, Małecka Arleta Maria, Budzińska Adrianna Justyna, Jarmuszkiewicz Wiesława, Ciszewska Liliana, Staszak Aleksandra M., Kijowska-Oberc Joanna, Ratajczak Ewelina
BMC Plant Biology 23(1) 496 DOI:10.1186/s12870-023-04516-0 IF=4,3

ISGF3 and STAT2/IRF9 Control Basal and IFN-Induced Transcription through Genome-Wide Binding of Phosphorylated and Unphosphorylated Complexes to Common ISRE-Containing ISGs (2023) Nowicka Hanna, Sekrecka Agata, Błaszczyk Katarzyna, Kluzek Katarzyna, Chang Chan-Yu, Wesoły Joanna Zofia, Lee Chien-Kuo, Bluyssen Hans
International Journal of Molecular Sciences 24(24) 17635 DOI:10.3390/ijms242417635 IF=4,9

Recent Insights into Plant miRNA Biogenesis: Multiple Layers of miRNA Level Regulation (2023) Bajczyk Mateusz, Jarmołowski Artur, Jóźwiak Monika, Pacak Andrzej, Pietrykowska Halina, Sierocka Izabela, Świda-Barteczka Aleksandra Kinga, Szewc Łukasz, Szweykowska-Kulińska Zofia
Plants 12(2) 342 DOI:10.3390/plants12020342 IF=4

Discovery of endogenous nitroxyl as a new redox player in Arabidopsis thaliana (2023) Arasimowicz-Jelonek Magdalena, Floryszak-Wieczorek J., Suarez Sebastian, Doctorovich F., Sobieszczuk-Nowicka Ewa Anna, Bruce King S., Milczarek G., Rębiś T., Gajewska Joanna, Jagodzik Przemysław, Żywicki Marek
Nature Plants 9, s. 36–44 DOI:10.1038/s41477-022-01301-z IF=15,8

Allele-specific quantitation of ATXN3 and HTT transcripts in polyQ disease models (2023) Joachimiak Paweł, Ciesiołka Adam, Kozłowska Emilia, Świtoński Paweł M., Figura Grzegorz, Ciołak Agata, Adamek Grażyna, Surdyka Magdalena, Kalinowska-Pośka Żaneta, Figiel Maciej, Caron Nicholas S., Hayden Michael R., Fiszer Agnieszka
BMC Biology 21(1) 17 DOI:10.1186/s12915-023-01515-3 IF=4,4

A cohort study reveals different dynamics of SARS-CoV-2-specific antibody formation after Comirnaty and Vaxzevria vaccination (2023) Augustyniak Adam, Szymański Tomasz, Porzucek Filip, Mieloch Adam, Semba Julia Anna, Hubert Katarzyna Anna, Grajek Dominika, Krela Rafał, Rogalska Zuzanna, Zalc-Budziszewska Ewa, Wysocki Sławomir, Sobczak Krzysztof, Kuczyński Lechosław Wojciech, Rybka Jakub Dalibor
Vaccine 41(34) s. 5037-5044 DOI:10.1016/j.vaccine.2023.06.008 IF=4,5

Physiological response of adult Salix aurita in wetland vegetation affected by flooding with As-rich fine pyrite particles (2023) Szuba Agnieszka, Ratajczak Ewelina, Leski Tomasz, Jasińska Anna K., Hanć Anetta, Piechalak Aneta, Woźniak Gabriela, Jagodziński Andrzej M.
Science of the Total Environment 865, 161197, DOI:10.1016/j.scitotenv.2022.161197 IF=8,2

Insight and Recommendations for Fragile X-Premutation-Associated Conditions from the Fifth International Conference on FMR1 Premutation (2023) Tassone Flora, Protic Dragana, Allen Emily Graves, Archibald Alison D., Baud Anna Honorata, Brown Ted W., Budimirovic Dejan B., Cohen Jonathan, Dufour Brett, Eiges Rachel, Elvassore Nicola, Gabis Lidia V., Grudzien Samantha J., Hall Deborah A., Hessl David, Hogan Abigail, Hunter Jessica Ezzell, Jin Peng, Jiraanont Poonnada, Klusek Jessica, Kooy R. Frank, Kraan Claudine M., Laterza Cecilia, Lee Andrea, Lipworth Karen, Losh Molly, Loesch Danuta, Lozano Reymundo, Mailick Marsha R., Manolopoulos Apostolos, Martinez-Cerdeno Veronica, McLennan Yingratana, Miller Robert M., Montanaro Federica Alice Maria, Mosconi Matthew W., Potter Sarah Nelson, Raspa Melissa, Rivera Susan M., Shelly Katharine, Todd Peter K., Tutak Katarzyna Maria, Wang Jianxian, Wheeler Anne, Winarni Tri Indah, Zafarullah Marwa, Hagerman Randi J.
Cells 12(18) 2330 DOI:10.3390/cells12182330 IF=5,1

Time-dependent recruitment of GAF, ISGF3 and IRF1 complexes shapes IFN? and IFN?-activated transcriptional responses and explains mechanistic and functional overlap (2023) Sekrecka Agata, Kluzek Katarzyna, Sekrecki Michał, Eskandarian Boroujeni Mahdi, Hassani Sanaz, Yamauchi Shota, Sada Kiyonao, Wesoły Joanna Zofia, Bluyssen Hans
Cellular and Molecular Life Sciences 80(7) 187 DOI:10.1007/s00018-023-04830-8 IF=6,2

Hyponastic Leaves 1 interacts with RNA Pol II to ensure proper transcription of microRNA genes (2023) Bielewicz Dawid, Dolata Jakub, Bajczyk Mateusz, Szewc Łukasz, Gulanicz Tomasz, Bhat Susheel, Karlik Anna, Jóźwiak Monika, Jarmołowski Artur, Szweykowska-Kulińska Zofia
Plant and Cell Physiology 64(6) s. 571–582 DOI:10.1093/pcp/pcad032 IF=3,9

PEP444c encoded within the MIR444c gene regulates microRNA444c accumulation in barley (2023) Chojnacka Aleksandra, Smoczynska Aleksandra, Bielewicz Dawid, Pacak Andrzej, Hensel Goetz, Kumlehn Jochen, Karłowski Wojciech Maciej, Grabsztunowicz Magda, Sobieszczuk-Nowicka Ewa Anna, Jarmołowski Artur, Szweykowska-Kulińska Zofia
Physiologia Plantarum 175(5) e14018 DOI:10.1111/ppl.14018 IF=5,4

The effects of nature?inspired amino acid substitutions on structural and biochemical properties of the E. coli L?asparaginase EcAIII (2023) Janicki Maciej, Ściuk Anna, Zieleziński Andrzej, Ruszkowski Milosz, Ludwików Agnieszka, Karłowski Wojciech Maciej, Jaskólski Mariusz, Loch Joanna I.
Protein Science 32(6) e4647 DOI:10.1002/pro.4647 IF=4,5

Solution structure and behaviour of the Arabidopsis thaliana HYL1 protein (2023) Wieczorek Przemysław, Jarmołowski Artur, Szweykowska-Kulińska Zofia, Kozak Maciej, Taube Michał
Biochimica et Biophysica Acta-General Subjects 1867(8) 130376 DOI:10.1016/j.bbagen.2023.130376 IF=2,8

SERRATE: a key factor in coordinated RNA processing in plants (2023) Jóźwiak Monika, Bielewicz Dawid, Szweykowska-Kulińska Zofia, Jarmołowski Artur, Bajczyk Mateusz
Trends in Plant Science 28(7) s. 841-853 DOI:10.1016/j.tplants.2023.03.009 IF=17,3

Empirical testing of cryoconite granulation: Role of cyanobacteria in the formation of key biogenic structure darkening glaciers in polar regions (2023) Wejnerowski Łukasz, Poniecka Ewa, Buda Jakub Andrzej, Klimaszyk Piotr, Piasecka Agnieszka, Dziuba Marcin Krzysztof, Mugnai Gianmarco, Takeuchi Nozomu, Zawierucha Krzysztof
Journal of Phycology 59(5) s. 939-949, DOI:10.1111/jpy.13372 IF=2,9

Biomimetic theranostic nanoparticles for effective anticancer therapy and MRI imaging (2023) Bigaj-Józefowska Magdalena Joanna, Coy Romero Luis Emerson, Załęski Karol, Zalewski Tomasz, Grabowska Małgorzata, Jaskot Kaja, Perrigue Patrick, Mrówczyński Radosław, Grześkowiak Bartosz
Journal of Photochemistry and Photobiology B-Biology 249, 112813 DOI:10.1016/j.jphotobiol.2023.112813 IF=3,9

How long can tardigrades survive in the anhydrobiotic state? A search for tardigrade anhydrobiosis patterns (2023) Roszkowska Milena, Gołdyn Bartłomiej, Wojciechowska Daria, Książkiewicz Zofia, Fiałkowska Edyta, Pluskota Mateusz, Kmita Hanna, Kaczmarek Łukasz
PLoS ONE 18(1) e0270386 DOI:10.1371/journal.pone.0270386 IF=3,7

Transcriptome Dynamics in Triticum aestivum Genotypes Associated with Resistance against the Wheat Dwarf Virus (2023) Sharaf Abdoallah, Nuc Przemysław, Ripl Jan, Alquicer Glenda, Ibrahim Emad, Wang Xifeng, Maruthi Midatharahally, Kundu Jiban Kumar
Viruses 15(3) 689 DOI: 10.3390/v15030689 IF=3,8

Genomic, transcriptomic, and metabolomic analysis of Oldenlandia corymbosa reveals the biosynthesis and mode of action of anti‐cancer metabolites (2023) Julca Irene, Mutwil-Anderwald Daniela, Manoj Vaishnervi, Khan Zahra, Lai Soak Kuan, Yang Lay K., Beh Ing T., Dziekan Jerzy, Lim Yoon P., Lim Shen K., Low Yee W., Lam Yuen I., Tjia Seth, Mu Yuguang, Tan Qiao W., Nuc Przemysław, Choo Le M., Khew Gillian, Shining Loo, Kam Antony, Tam James P., Bozdech Zbynek, Schmidt Maximilian, Usadel Bjoern, Kanagasundaram Yoganathan, Alseekh Saleh, Fernie Alisdair, Li Hoi Y., Mutwil Marek
J. Integr. Plant Biol. 65(6) s. 1442-1466 DOI:10.1111/jipb.13469 IF=9,3

2022

Excess nitrogen responsive HvMADS27 transcription factor controls barley root architecture by regulating abscisic acid level (2022) Smoczyńska Aleksandra, Pacak Andrzej, Grabowska Aleksandra, Bielewicz Dawid, Zadworny Marcin, Singh Kashmir, Dolata Jakub, Bajczyk Mateusz, Nuc Przemysław, Kesy Jacek, Woźniak Magdalena, Ratajczak Izabela, Harwood Wendy, Karłowski Wojciech Maciej, Jarmołowski Artur, Szweykowska-Kulińska Zofia
Frontiers in Plant Science 13, 950796 DOI:10.3389/fpls.2022.950796 IF=5,6

Human pancreatic microenvironment promotes ?-cell differentiation via non-canonical WNT5A/JNK and BMP signaling (2022) Chmielowiec Jolanta, Szlachcic Wojciech, Yang Diane, Scavuzzo Marissa A., Wamble Katrina, Sarrion-Perdigones Alejandro, Sabek Omaima M., Venken Koen J. T., Borowiak Małgorzata
Nature Communications 13(1) 1952 DOI:10.1038/s41467-022-29646-1 IF=16,6

Editorial: Protein phosphorylation and dephosphorylation in plant-microbe interactions (2022) Su Jianbin, Lu Yi-Ju, Staal Jens, Ludwików Agnieszka
Frontiers in Plant Science 13, 1020772 DOI:10.3389/fpls.2022.1020772 IF=5,6

Slow RNAPII Transcription Elongation Rate, Low Levels of RNAPII Pausing, and Elevated Histone H1 Content at Promoters Associate with Higher m6A Deposition on Nascent mRNAs (2022) Gallego Alicia, Fernández-Justel José Miguel, Martín-Vírgala Sara, Masłoń Magdalena, Gómez María
Genes 13, 1652 DOI:10.3390/genes13091652 IF=3,5

Isotope-labeled amyloid-β does not transmit to the brain in a prion?like manner after peripheral administration (2022) Brackhan Mirjam, Calza Giulio, Lundgren Kristiina, Bascu?ana Pablo, Brüning Thomas, Soliymani Rabah, Kumar Rakesh, Abelein Axel, Baumann Marc, Łałowski Maciej, Pahnke Jens
EMBO Reports 23( 7) e54405 DOI:10.15252/embr.202154405 IF=7,7

Chronic exposure to methadone impairs memory, induces microgliosis, astrogliosis and neuroinflammation in the hippocampus of adult male rats (2022) Navaei Fatemeh, Fathabadi Fatemeh Fadaei, Moghaddam Meysam Hassani, Fathi Mobina, Vakili Kimia, Abdollahifar Mohammad-Amin, Eskandarian Boroujeni Mahdi, Zamani Naghmeh, Zamani Nasim, Norouzian Mohsen, Aliaghaei Abbas
Journal of Chemical Neuroanatomy 125, 102139 DOI:10.1016/j.jchemneu.2022.102139 IF=2,8

COVID-19 causes neuronal degeneration and reduces neurogenesis in human hippocampus (2022) Bayat Amir-Hossein, Azimi Helia, Hassani Moghaddam Meysam, Ebrahimi Vahid, Fathi Mobina, Vakili Kimia, Mahmoudiasl Gholam-Reza, Forouzesh Mahdi, Eskandarian Boroujeni Mahdi, Nariman Zahra, Abbaszadeh Hojjat-Allah, Aryan Arefeh, Aliaghaei Abbas, Abdollahifar Mohammad-Amin
Apoptosis 27(11-12) s. 852-868 DOI:10.1007/s10495-022-01754-9 IF=7,2

SMER28 Attenuates PI3K/mTOR Signaling by Direct Inhibition of PI3K p110 Delta (2022) Kirchenwitz Marco, Stahnke Stephanie, Prettin Silvia, Borowiak Małgorzata, Menke Laura, Sieben Christian, Birchmeier Carmen, Rottner Klemens, Stradal Theresia E. B., Steffen Anika
Cells 11(10) 1648 DOI:10.3390/cells11101648 IF=6

Organelles and phytohormones: a network of interactions in plant stress responses (2022) Bittner Andras, Cieśla Agata, Gruden Kristina, Lukan Tjaša, Mahmud Sakil, Teige Markus, Vothknecht Ute C, Wurzinger Bernhard
Journal of Experimental Botany 73(21) s. 7165-7181 DOI:10.1093/jxb/erac384 IF=6,9

Common Dynamic Determinants Govern Quorum Quenching Activity in N-Terminal Serine Hydrolases (2022) Surpeta Bartłomiej, Grulich Michal, Palyzová Andrea, Marešová Helena, Brezovsky Jan
ACS Catalysis 12(11) s. 6359-6374 DOI:10.1021/acscatal.2c00569 IF=12,9

A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis (2022) Zhang Runxuan, Kuo Richard, Coulter Max, Calixto Cristiane P. G., Entizne Juan Carlos, Guo Wenbin, Marquez Yamile, Milne Linda, Riegler Stefan, Matsui Akihiro, Tanaka Maho, Harvey Sarah, Gao Yubang, Wießner-Kroh Theresa, Paniagua Alejandro, Crespi Martin, Denby Katherine, Hur Asa ben, Huq Enamul, Jantsch Michael, Jarmołowski Artur, Koester Tino, Laubinger Sascha, Li Qikun, Gu Lianfeng, Seki Motoaki, Staiger Dorothee, Sunkar Ramanjulu, Szweykowska-Kulińska Zofia, Tu Shih-Long, Wachter Andreas, Waugh Robbie, Xiong Liming, Zhang Xiao-Ning, Conesa Ana, Reddy Anireddy S. N., Barta Andrea, Kalyna Maria, Brown John W. S.
Genome Biology 23(1) 149 DOI:10.1186/s13059-022-02711-0 IF=12,3

Structural Characteristics of the 5?-Terminal Region of Mouse p53 mRNA and Identification of Proteins That Bind to This mRNA Region (2022) Szpotkowska Joanna, Szpotkowski Kamil, Ciesiołka Jerzy
International Journal of Molecular Sciences 23(17) 9709 DOI:10.3390/ijms23179709 IF=5,6

Integrative Organelle-Based Functional Proteomics: In Silico Prediction of Impaired Functional Annotations in SACS KO Cell Model (2022) Morani Federica, Doccini Stefano, Galatolo Daniele, Pezzini Francesco, Soliymani Rabah, Simonati Alessandro, Łałowski Maciej, Gemignani Federica, Santorelli Filippo M.
Biomolecules 12(8) 1024 DOI:10.3390/biom12081024 IF=5,5

PHIST: fast and accurate prediction of prokaryotic hosts from metagenomic viral sequences (2022) Zieleziński Andrzej, Deorowicz Sebastian, Gudyś Adam
Bioinformatics 38(5) s. 1447-1449 DOI:10.1093/bioinformatics/btab837 IF=5,8

Anti-inflammatory effect of green photobiomodulation in human adipose-derived mesenchymal stem cells (2022) Tamimi Reyhaneh, Mahmoodi Nadia Malek, Samadikhah Hamid Reza, Tackallou Saeed Hesami, Benisi Soheila Zamanlui, Eskandarian Boroujeni Mahdi
Lasers in Medical Science 37(9) s. 3693-3703 DOI:10.1007/s10103-022-03654-5 IF=2,1

Context-Dependent Regulation of Gene Expression by Non-Canonical Small RNAs (2022) Plawgo Kinga, Raczyńska Katarzyna Dorota
Non-coding RNA 8(3) s. 29 DOI:10.3390/ncrna8030029 IF=4,3

Unveiling the Function of the Mitochondrial Filament-Forming Protein LACTB in Lipid Metabolism and Cancer (2022) Cascone Annunziata, Łałowski Maciej, Lindholm Dan, Eriksson Ove
Cells 11(10) 1703 DOI:10.3390/cells11101703 IF=6

KH domain proteins: Another family of bacterial RNA matchmakers? (2022) Olejniczak Mikołaj, Jiang Xiaofang, Basczok Maciej, Storz Gisela
Molecular Microbiology 117(1) s. 10-19 DOI:10.1111/mmi.14842 IF=3,6

Sustainable recovery of MBNL activity in autoregulatory feedback loop in myotonic dystrophy (2022) Rogalska Zuzanna, Sobczak Krzysztof
Molecular Therapy-Nucleic Acids 30 s. 438-448 DOI:10.1016/j.omtn.2022.10.023 IF=8,8

Spheroid Culture Differentially Affects Cancer Cell Sensitivity to Drugs in Melanoma and RCC Models (2022) Filipiak-Duliban Aleksandra, Brodaczewska Klaudia, Kajdasz Arkadiusz, Kieda Claudine
International Journal of Molecular Sciences 23(3) 1166 DOI:10.3390/ijms23031166 IF=5,6

Histone H1 regulates non-coding RNA turnover on chromatin in a m6A-dependent manner (2022) Fernández-Justel José Miguel, Santa-María Cristina, Martín-Vírgala Sara, Ramesh Shreya, Ferrera-Lagoa Alberto, Salinas-Pena Mónica, Isoler-Alcaraz Javier, Masłoń Magdalena, Jordan Albert, Cáceres Javier F., Gómez María
Cell Reports 40(11) 111329 DOI:10.1016/j.celrep.2022.111329 IF=8,8

Endurance Training Increases the Running Performance of Untrained Men without Changing the Mitochondrial Volume Density in the Gastrocnemius Muscle (2022) Zoladz Jerzy A., Majerczak Joanna, Gałgański Łukasz, Grandys Marcin, Zapart-Bukowska Justyna, Kuczek Piotr, Kołodziejski Leszek, Walkowicz Lucyna, Szymoniak-Chochół Dorota, Kilarski Wincenty, Jarmuszkiewicz Wiesława
International Journal of Molecular Sciences 23(18) 10843 DOI:10.3390/ijms231810843 IF=5,6

Lysosomal Proteomics Links Disturbances in Lipid Homeostasis and Sphingolipid Metabolism to CLN5 Disease (2022) Doccini Stefano, Marchese Maria, Morani Federica, Gammaldi Nicola, Mero Serena, Pezzini Francesco, Soliymani Rabah, Santi Melissa, Signore Giovanni, Ogi Asahi, Rocchiccioli Silvia, Kanninen Katja M., Simonati Alessandro, Łałowski Maciej, Santorelli Filippo M.
Cells 11(11) 1840 DOI:10.3390/cells11111840 IF=6

A dormant T?cell population with autoimmune potential exhibits low self?reactivity and infiltrates islets in type 1 diabetes (2022) Kong Yuelin, Jing Yi, Allard Denise, Scavuzzo Marissa A., Sprouse Maran L., Borowiak Małgorzata, Bettini Matthew L., Bettini Maria
European Journal of Immunology 52(7) s. 1158-1170 DOI:10.1002/eji.202149690 IF=5,4

Cold stress?induced miRNA and degradome changes in four soybean varieties differing in chilling resistance (2022) Kuczyński Jakub, Gracz-Bernaciak Joanna, Twardowski Tomasz, Karłowski Wojciech Maciej, Tyczewska Agata
Journal of Agronomy and Crop Science 208(6) s. 777-794 DOI:10.1111/jac.12557 IF=3,5

Combined molecular, structural and memory data unravel the destructive effect of tramadol on hippocampus (2022) Khatmi Aysan, Eskandarian Boroujeni Mahdi, Ezi Samira, Mirbehbahani Seyed Hamidreza, Aghajanpour Fakhroddin, Soltani Reza, Meftahi Gholam Hossein, Abdollahifar Mohammad-Amin, Hassani Moghaddam Meysam, Toreyhi Hossein, Khodagholi Fariba, Aliaghaei Abbas
Neuroscience Letters 771, 136418 DOI:10.1016/j.neulet.2021.136418 IF=2,5

Long Intergenic Noncoding RNAs Affect Biological Pathways Underlying Autoimmune and Neurodegenerative Disorders (2022) Plewka Patrycja, Raczyńska Katarzyna Dorota
Molecular Neurobiology 59(9) s. 5785-5808 DOI:10.1007/s12035-022-02941-0 IF=5,1

H2A.Z contributes to trithorax activity at the AGAMOUS locus (2022) Lee Un-Sa, Bieluszewski Tomasz, Xiao Jun, Yamaguchi Ayako, Wagner Doris
Molecular Plant 15(2) s. 207-210 DOI:10.1016/j.molp.2022.01.005 IF=27,5

R-loops at microRNA encoding loci promote co-transcriptional processing of pri-miRNAs in plants (2022) Gonzalo Lucia, Tossolini Ileana, Gulanicz Tomasz, Cambiagno Damian A., Kasprowicz-Maluśki Anna, Smolinski Dariusz Jan, Mammarella María Florencia, Ariel Federico D., Marquardt Sebastian, Szweykowska-Kulińska Zofia, Jarmołowski Artur, Manavella Pablo A.
Nature Plants 8(4)s. 402-418 DOI:10.1038/s41477-022-01125-x IF=18

Biogenesis, conservation, and function of miRNA in liverworts (2022) Pietrykowska Halina, Sierocka Izabela, Zieleziński Andrzej, Alisha Alisha, Carrasco-Sanchez Juan Carlo, Jarmołowski Artur, Karłowski Wojciech Maciej, Szweykowska-Kulińska Zofia
Journal of Experimental Botany 73(13) s. 4528–4545 DOI:10.1093/jxb/erac098 IF=6,9

Distribution of alternative untranslated regions within the mRNA of the CELF1 splicing factor affects its expression (2022) Kajdasz Arkadiusz, Niewiadomska Daria, Sekrecki Michał, Sobczak Krzysztof
Scientific Reports 12(1), 190 DOI:10.1038/s41598-021-03901-9 IF=4,6

The MYB33, MYB65, and MYB101 transcription factors affect Arabidopsis and potato responses to drought by regulating the ABA signaling pathway (2022) Wyrzykowska Anna, Bielewicz Dawid, Plewka Patrycja, Sołtys?Kalina Dorota, Wasilewicz?Flis Iwona, Marczewski Waldemar, Jarmołowski Artur, Szweykowska-Kulińska Zofia
Physiologia Plantarum 174(5) e13775 DOI:10.1111/ppl.13775 IF=6,4

Daily Reports on Phage-Host Interactions (2022) Albrycht Kamil, Rynkiewicz Adam A., Harasymczuk Michal, Barylski Jakub, Zieleziński Andrzej
Frontiers in Microbiology 13, 946070 DOI:10.3389/fmicb.2022.946070 IF=5,2

Spinal muscular atrophy: Where are we now? Current challenges and high hopes (2022) Przymuszała Marta, Gwit Maria, Waśko Jadwiga Anna, Morańska Katarzyna, Kajdasz Arkadiusz
Postępy Higieny i Medycyny Doświadczalnej 76(1) s. 407-419 DOI:10.2478/ahem-2022-0030 IF=0,3

SINBAD, structural, experimental and clinical characterization of STAT inhibitors and their potential applications (2022) Plens-Gałąska Martyna, Woźniak Tomasz, Wesoły Joanna Zofia, Bluyssen Hans
Scientific data 9(1) 139 DOI:10.1038/s41597-022-01243-3 IF=9,8

Tropical red alga Compsopogon caeruleus: an indicator of thermally polluted waters of Europe in the context of temperature and oxygen requirements (2022) Rybak Andrzej Stanisław, Woyda-Płoszczyca Andrzej
Algae 37(4) s. 301-316 DOI:10.4490/algae.2022.37.11.18 IF=3,2

Diabetes and SARS-CoV-2–Is There a Mutual Connection? (2022) Jedrzejak Anna P., Urbaniak Edyta Karolina, Waśko Jadwiga Anna, Ziojła Natalia, Borowiak Małgorzata
Frontiers in Cell and Developmental Biology 10, 913305 DOI:10.3389/fcell.2022.913305 IF=5,5

Histone–lysine N-methyltransferase 2 (KMT2) complexes – a new perspective (2022) Poręba Elżbieta, Leśniewicz Krzysztof, Durzyńska Julia Łucja
Mutation Research-Reviews in Mutation Research 790, 108443 DOI:10.1016/j.mrrev.2022.108443 IF=5,3

Mitogen Synergy: An Emerging Route to Boosting Human Beta Cell Proliferation (2022) Shcheglova Ekaterina, Błaszczyk Katarzyna, Borowiak Małgorzata
Frontiers in Cell and Developmental Biology vol. 9, 734597 DOI:10.3389/fcell.2021.734597 IF=5,5

Effects of Endurance Training on the Coenzyme Q Redox State in Rat Heart, Liver, and Brain at the Tissue and Mitochondrial Levels: Implications for Reactive Oxygen Species Formation and Respiratory Chain Remodeling (2022) Dominiak Karolina, Gałgański Łukasz, Budzińska Adrianna Justyna, Woyda-Płoszczyca Andrzej, Zoladz Jerzy A., Jarmuszkiewicz Wiesława
International Journal of Molecular Sciences 23(2) 896 DOI:10.3390/ijms23020896 IF=5,6

Applicable Life-History and Molecular Traits for Studying the Effects of Anhydrobiosis on Aging in Tardigrades (2022) Nagwani Amit, Kaczmarek Łukasz, Kmita Hanna
Diversity 14(8) 664 DOI:10.3390/d14080664 IF=2,4

NuA4 and H2A.Z control environmental responses and autotrophic growth in Arabidopsis (2022) Bieluszewski Tomasz, Sura Weronika, Dzięgielewski Wojciech, Bieluszewska Anna, Lachance Catherine, Kabza Michał, Szymańska-Lejman Maja, Abram Mateusz, Wlodzimierz Piotr, De Winne Nancy, De Jaeger Geert, Sadowski Jan, Côté Jacques, Ziółkowski Piotr
Nature Communications 13(1) 277 DOI:10.1038/s41467-021-27882-5 IF=16,6

Partners in crime: Proteins implicated in RNA repeat expansion diseases (2022) Baud Anna Honorata, Derbis Magdalena, Tutak Katarzyna Maria, Sobczak Krzysztof
Wiley Interdisciplinary Reviews-RNA 13(4) e1709 DOI:10.1002/wrna.1709 IF=7,3

SARS-CoV-2 infects an in vitro model of the human developing pancreas through endocytosis (2022) Szlachcic Wojciech, Dabrowska Agnieszka, Milewska Aleksandra, Ziojła Natalia, Błaszczyk Katarzyna, Barreto-Duran Emilia, Sanak Marek, Surmiak Marcin, Owczarek Katarzyna, Grzanka Dariusz, Durzyńska Julia Łucja, Pyrc Krzysztof, Borowiak Małgorzata
iScience 25(7) 104594 DOI:10.1016/j.isci.2022.104594 IF=5,8

TransportTools: a library for high-throughput analyses of internal voids in biomolecules and ligand transport through them (2022) Brezovsky Jan, Thirunavukarasu Aravind, Surpeta Bartłomiej, Sequeiros Borja Carlos Eduardo, Mandal Nishita, Sarkar Dheeraj, Dongmo Foumthuim Cedrix J, Agrawal Nikhil
Bioinformatics 38(6) s. 1752-1753 DOI:10.1093/bioinformatics/btab872 IF=5,8

CLP1-dependent premature transcription termination opposes neurodegeneration (2022) Gdula Michał, Kopczyńska Magda, Saha Upasana, Kamieniarz-Gdula Kinga Maria
Neuron 110(8) s. 1277-1280 DOI:10.1016/j.neuron.2022.03.012 IF=16,2

The Novel Role of hnRNP UL1 in Human Cell Nucleoli (2022) Cichocka Marlena, Karlik Anna, Plewka Patrycja, Gawade Kishor, Stępień Agata Katarzyna, Świergiel Patrycja Agnieszka, Gadgil Ankur, Raczyńska Katarzyna Dorota
International Journal of Biological Sciences 18(13) s. 4809-4823 DOI:10.7150/ijbs.75084 IF=9,2

Massive annotation of bacterial l-asparaginases reveals their puzzling distribution and frequent gene transfer events (2022) Zieleziński Andrzej, Loch Joanna I., Karłowski Wojciech Maciej, Jaskólski Mariusz
Scientific Reports 12(1) 15797 DOI:10.1038/s41598-022-19689-1 IF=4,6

Verification of Hypsibius exemplaris Gąsiorek et al., 2018 (Eutardigrada; Hypsibiidae) application in anhydrobiosis research (2022) Poprawa Izabela, Bartylak Tomasz, Kulpla Adam, Erdmann Weronika, Roszkowska Milena, Chajec Łukasz, Kaczmarek Łukasz, Karachitos Andonis, Kmita Hanna
PLoS ONE 17(3) e0261485 DOI:10.1371/journal.pone.0261485 IF=3,7

Dysregulated Interferon Response and Immune Hyperactivation in Severe COVID-19: Targeting STATs as a Novel Therapeutic Strategy (2022) Eskandarian Boroujeni Mahdi, Sekrecka Agata, Antończyk Aleksandra, Hassani Sanaz, Sekrecki Michał, Nowicka Hanna, Łopacinska Natalia, Olya Mohammad Emad, Kluzek Katarzyna, Wesoły Joanna Zofia, Bluyssen Hans
Frontiers in Immunology 13, 888897 DOI:10.3389/fimmu.2022.888897 IF=7,3

Chromatin-associated microprocessor assembly is regulated by the U1 snRNP auxiliary protein PRP40 (2022) Stępień Agata Katarzyna, Dolata Jakub, Gulanicz Tomasz, Bielewicz Dawid, Bajczyk Mateusz, Smolinski Dariusz J, Szweykowska-Kulińska Zofia, Jarmołowski Artur
Plant Cell 34(12) 4920–4935 DOI:10.1093/plcell/koac278 IF=11,6

mi-R218 affects the ECM composition and cell biomechanical properties of glioblastoma cells (2022) Grabowska Małgorzata, Kuczyński Konrad, Piwecka Monika, Rabiasz Alicja, Zemła Joanna, Głodowicz Paweł, Wawrzyniak Dariusz, Lekka Małgorzata, Rolle Katarzyna Monika
Journal of Cellular and Molecular Medicine 26(14) s. 3913-3930 DOI:10.1111/jcmm.17428 IF=5,3

2021

Short antisense oligonucleotides alleviate the pleiotropic toxicity of RNA harboring expanded CGG repeats (2021) Derbis Magdalena, Kul Emre, Niewiadomska Daria, Sekrecki Michał, Piasecka Agnieszka, Taylor Katarzyna, Hukema Renate , Stork Oliver, Sobczak Krzysztof:
Nature Communications 12, 1265 DOI:10.1038/s41467-021-21021-w IF=12,1

How the Geomagnetic Field Influences Life on Earth – An Integrated Approach to Geomagnetobiology (2021) Erdmann Weronika, Kmita Hanna, Kosicki Jakub, Kaczmarek Łukasz
Origins of Life and Evolution of Biospheres 51, s. 231–257 DOI:10.1007/s11084-021-09612-5 IF=1,8

U7 snRNA: A tool for gene therapy (2021) Gadgil Ankur, Raczyńska Katarzyna Dorota:
Journal of Gene Medicine 78(4) s. 1577-1596 DOI:10.1002/jgm.3321 IF=3,3

ALS-linked FUS mutants affect the localization of U7 snRNP and replication-dependent histone gene expression in human cells (2021) Gadgil Ankur, Walczak Agnieszka, Stępień Agata Katarzyna, Mechtersheimer Jonas, Nishimura Agnes Lumi, Shaw Christopher E., Ruepp Marc-David, Raczyńska Katarzyna Dorota
Scientific Reports 11, 11868 DOI:10.1038/s41598-021-91453-3 IF=4

Arsenic uptake, speciation and physiological response of tree species (Acer pseudoplatanus, Betula pendula and Quercus robur) treated with dimethylarsinic acid (2021) Gąsecka Monika, Drzewiecka Kinga, Magdziak Katarzyna, Piechalak Aneta, Budka Anna, Waliszewska Grażyna, Szentner Kinga, Goliński Przemysław, Niedzielski Przemysław, Budzyńska Sylwia, Mleczek Mirosław
Chemosphere 22(13) 7153 DOI:10.3390/ijms22137153 IF=4,2

Axial variability of anatomical structure and the scaling relationships in Scots pine (Pinus sylvestris L.) needles of contrasting origins (2021) Jankowski Artur, Wyka Tomasz Piotr, Oleksyn Jacek
Flora 274, 151747 DOI:10.1016/j.flora.2020.151747 IF=1,6

Identification of RCC Subtype-Specific microRNAs–Meta-Analysis of High-Throughput RCC Tumor microRNA Expression Data (2021) Kajdasz Arkadiusz, Majer Weronika, Kluzek Katarzyna, Sobkowiak Jacek, Milecki Tomasz, Derebecka Natalia, Kwias Zbigniew, Bluyssen Hans, Wesoły Joanna Zofia:
Cancers 13(3) 548 DOI:10.3390/cancers13030548 IF=6,2

RNA and DNA G‑quadruplexes bind to human dicer and inhibit its activity (2021) Koralewska Natalia, Szczepanska Agnieszka, Ciechanowska Kinga, Wojnicka Marta, Pokornowska Maria, Milewski Marek, Gudanis Dorota, Baranowski Daniel, Nithin Chandran, Bujnicki Janusz, Gdaniec Zofia, Figlerowicz Marek, Kurzynska‑Kokorniak Anna
Cellular and Molecular Life Sciences 78 s. 3709–3724 DOI:10.1007/s00018-021-03795-w IF=6,5

Relationship between mitochondrial changes and seed aging as a limitation of viability for the storage of beech seed (Fagus sylvatica L.) (2021) Małecka Arleta Maria, Ciszewska Liliana Maria, Staszak Aleksandra, Ratajczak Ewelina
PeerJ 9, e10569 DOI:10.7717/peerj.10569 IF=2,4

The Diversity of the Mitochondrial Outer Membrane Protein Import Channels: Emerging Targets for Modulation (2021) Mazur Monika, Kmita Hanna, Wojtkowska Małgorzata
Molecules 26(13) 4087 DOI:10.3390/molecules26134087 IF=3,1

Mitochondrial Processes during Early Development of Dictyostelium discoideum: From Bioenergetic to Proteomic Studies (2021) Mazur Monika, Wojciechowska Daria, Sitkiewicz Ewa, Malinowska Agata, Świderska Bianka, Kmita Hanna, Wojtkowska Małgorzata
Genes 12(5) 638 DOI:10.3390/genes12050638 IF=3,3

Identification of Novel miRNAs and Their Target Genes in the Response to Abscisic Acid in Arabidopsis (2021) Mehdi Syed, Krishnamoorthy Sivakumar, Szcześniak Michał, Ludwików Agnieszka
International Journal of Molecular Sciences 22(13) 7153 DOI:10.3390/ijms22137153 IF=4,2

MEF2C shapes the microtranscriptome during differentiation of skeletal muscles (2021) Piasecka Agnieszka, Sekrecki Michał, Szcześniak Michał, Sobczak Krzysztof:
Scientific Reports 11, 3476 DOI:10.1038/s41598-021-82706-2 IF=4

Tips and tricks how to culture water bears: simple protocols for culturing eutardigrades (Tardigrada) under laboratory conditions (2021) Roszkowska Milena, Wojciechowska Daria, Kmita Hanna, Cerbin Sławomir, Dziuba Marcin, Fiałkowska Edyta, Sobkowiak Robert Mikołaj, Szydło Wiktoria, Kaczmarek Łukasz:
European Zoological Journal 88(1) s. 449–465 DOI:10.1080/24750263.2021.1881631 IF=1,7

The Open State Selectivity of the Bean Seed VDAC Depends on Stigmasterol and Ion Concentration (2021) Saidani Hayet, Léonetti Marc, Kmita Hanna, Homblé Fabrice
International Journal of Molecular Sciences 22(6) 3034 DOI:10.3390/ijms22063034 IF=4,2

Pi-starvation induced transcriptional changes in barley revealed by a comprehensive RNA-Seq and degradome analyses (2021) Sega Paweł, Kruszka Katarzyna, Bielewicz Dawid, Karłowski Wojciech Maciej, Nuc Przemysław, Szweykowska-Kulińska Zofia, Pacak Andrzej:
BMC Genomics 2170 s. 53-77 DOI:10.1186/s12864-021-07481-w IF=3,6

Recent advances in user-friendly computational tools to engineer protein function (2021) Sequeiros Borja Carlos, Surpeta Bartłomiej, Brezovsky Jan
Briefings in Bioinformatics 22(3) 150 DOI:10.1093/bib/bbaa150 IF=9

AnnapuRNA: A scoring function for predicting RNA-small molecule binding poses (2021) Stefaniak Filip, Bujnicki Janusz
PLOS Computational Biology 17(2) e1008309 DOI:10.1371/journal.pcbi.1008309 IF=5,1

RNAcentral 2021: secondary structure integration, improved sequence search and new member databases (2021) Sweeney Blake , Petrov Andrej, Ribas Carlos , Finn Robert , Bateman Alex, Szymański Maciej, Karłowski Wojciech Maciej, Seemann Stefan , Gorodkin Jan, Cannone Jamie , Gutell Robin , Kay Simon, Marygold Steven, dos Santos Gil, Frankish Adam, Mudge Jonathan M, Barshir Ruth, Fishilevich Simon, Chan Patricia , Lowe Todd , Seal Ruth, Bruford Elspeth, Panni Simona, Porras Pablo, Karagkouni Dimitra, Hatzigeorgiou Artemis , Ma Lina, Zhang Zhang, Volders Pieter-Jan, Mestdagh Pieter, Griffiths-Jones Sam, Fromm Bastian, Peterson Kevin , Kalvari Ioanna, Nawrocki Eric , Petrov Andrej, Weng Shuai, Bouchard-Bourelle Philia, Scott Michelle, Lui Lauren M, Hoksza David, Lovering Ruth , Kramarz Barbara, Mani Prita, Ramachandran Sridhar, Weinberg Zasha:
Nucleic Acids Research 49(D1)gkaa921 DOI:10.1093/nar/gkaa921 IF=11,5

Endocrine Pancreas Development and Dysfunction Through the Lens of Single-Cell RNA-Sequencing (2021) Szlachcic Wojciech, Ziojła Natalia, Kizewska Dorota , Kempa Marcelina, Borowiak Małgorzata
Frontiers in Cell and Developmental Biology 9, 629212 DOI:10.3389/fcell.2021.629212 IF=5,2

Defining a novel domain that provides an essential contribution to site-specific interaction of Rep protein with DNA (2021) Wegrzyn Katarzyna, Zabrocka Elzbieta, Bury Katarzyna, Tomiczek Bartlomiej, Wieczor Milosz, Czub Jacek, Uciechowska Urszula, Moreno-del Alamo Maria, Walkow Urszula, Grochowina Igor, Dutkiewicz Rafal, Bujnicki Janusz, Giraldo Rafael, Konieczny Igor
Nucleic Acids Research 49(6) s. 3394–3408 DOI:10.1093/nar/gkab113 IF=11,5

Mitochondrial alternative oxidase contributes to successful tardigrade anhydrobiosis (2021) Wojciechowska Daria, Karachitos Andonis, Roszkowska Milena, Rzeźniczak Wiktor, Sobkowiak Robert Mikołaj, Kaczmarek Łukasz, Kosicki Jakub, Kmita Hanna
Frontiers in Zoology 18, 15 DOI:10.1186/s12983-021-00400-5 IF=2,6

From Transcriptome to Behavior: Intranasal Injection of Late Passage Human Olfactory Stem Cells Displays Potential in a Rat Model of Parkinson’s Disease (2021) Alizadeh Rafieh, Eskandarian Boroujeni Mahdi, Kamrava Seyed Kamran, Tehrani Ava Modirzadeh, Bagher Zohreh, Heidari Fatemeh, Bluyssen Hans, Farhadi Mohammad
ACS Chemical Neuroscience 12(12) s. 2209-2217 DOI:10.1021/acschemneuro.1c00225 IF=4,5

The role of Tetrahydrocannabinol in inducing disrupted signaling cascades, hippocampal atrophy and memory defects (2021) Barfi Elahe, Tehrani Ava Modirzadeh, Mohammadpanah Mojtaba, Eskandarian Boroujeni Mahdi, Meftahi Gholam Hossein, Sadeghi Yousef, Eziy Samira, Khatmi Aysan, Abdollahifar Mohammad Amin, Ghorbani Zeynab, Aliaghaei Abbas
Journal of Chemical Neuroanatomy 113, 101943 DOI:10.1016/j.jchemneu.2021.101943 IF=2,4

PRC2 activity, recruitment, and silencing: a comparative perspective (2021) Bieluszewski Tomasz, Xiao Jun, Yang Yiman, Wagner Doris
Trends in Plant Science 26(11) s. 1186-1198 DOI:10.1016/j.tplants.2021.06.006 IF=14,4

A human liver chimeric mouse model for non-alcoholic fatty liver disease (2021) Bissig-Choisat Beatrice, Alves-Bezerra Michele, Zorman Barry, Ochsner Scott A., Barzi Mercedes, Legras Xavier, Yang Diane, Borowiak Małgorzata, Dean Adam M., York Robert B., Galvan N. Thao N., Goss John, Lagor William R., Moore David D., Cohen David E., McKenna Neil J., Sumazin Pavel, Bissig Karl-Dimiter
JHEP Reports 3(3) 100281 DOI:10.1016/j.jhepr.2021.100281 IF=9,9

A Modified Meiotic Recombination in Brassica napus Largely Improves Its Breeding Efficiency (2021) Boideau Franz, Pele Alexandre, Tanguy Coleen, Trotoux Gwenn, Eber Frédérique, Maillet Loeiz, Gilet Marie, Lodé-Taburel Maryse, Huteau Virginie, Morice Jérôme, Coriton Olivier, Falentin Cyril, Delourme Régine, Rousseau-Gueutin Mathieu, Chevre Anne-Marie
Biology 10(8) 771 DOI:10.3390/biology10080771 IF=5,1

The Role of RNA Secondary Structure in Regulation of Gene Expression in Bacteria (2021) Chełkowska-Pauszek Agnieszka, Kosiński Jan, Marciniak Klementyna, Wysocka Marta Katarzyna, Bąkowska-Żywicka Kamilla, Żywicki Marek
International Journal of Molecular Sciences 22(15) 7845 DOI:10.3390/ijms22157845 IF=4,2

RaFAH: Host prediction for viruses of Bacteria and Archaea based on protein content (2021) Coutinho Felipe Hernandes, Zaragoza-Solas Asier, López-Pérez Mario, Barylski Jakub, Zieleziński Andrzej, Dutilh Bas E., Edwards Robert, Rodriguez-Valera Francisco
Patterns 2(7) 100274 DOI:10.1016/j.patter.2021.100274 IF=6,5

The Relationship between Mitochondrial Reactive Oxygen Species Production and Mitochondrial Energetics in Rat Tissues with Different Contents of Reduced Coenzyme Q (2021) Dominiak Karolina, Jarmuszkiewicz Wiesława
Antioxidants 10(4) 533 DOI:10.3390/antiox10040533 IF=5

License to Regulate: Noncoding RNA Special Agents in Plant Meiosis and Reproduction (2021) Dzięgielewski Wojciech, Ziółkowski Piotr
Frontiers in Plant Science 12, 662185 DOI:10.3389/fpls.2021.662185 IF=4,4

Transplantation of human dental pulp stem cells compensates for striatal atrophy and modulates neuro-inflammation in 3-nitropropionic acid rat model of Huntington’s disease (2021) Eskandari Neda, Eskandarian Boroujeni Mahdi, Abdollahifar Mohammad Amin, Piryaei Abbas, Khodagholi Fariba, Mirbehbahani Seyed Hamidreza, Siroosi Shokoofeh, Moghaddam Meysam Hassani, Aliaghaei Abbas, Sadeghi Yousef
Neuroscience Research 170 s. 133-144 DOI:10.1016/j.neures.2020.12.002 IF=2,6

Inflammatory Response Leads to Neuronal Death in Human Post-Mortem Cerebral Cortex in Patients with COVID-19 (2021) Eskandarian Boroujeni Mahdi, Simani Leila, Bluyssen Hans, Samadikhah Hamid Reza, Zamanlui Benisi Soheila, Hassani Sanaz, Akbari Dilmaghani Nader, Fathi Mobina, Vakili Kimia, Mahmoudiasl Gholam-Reza, Abbaszadeh Hojjat Allah, Hassani Moghaddam Meysam, Abdollahifar Mohammad-Amin, Aliaghaei Abbas
ACS Chemical Neuroscience 12(12) s. 2143-2150 DOI:10.1021/acschemneuro.1c00111 IF=4,5

Chronic Exposure to Tramadol Induces Neurodegeneration in the Cerebellum of Adult Male Rats (2021) Ezi Samira, Eskandarian Boroujeni Mahdi, Khatmi Aysan, Vakili Kimia, Fathi Mobina, Abdollahifar Mohammad-Amin, Aghajanpour Fakhroddin, Soltani Reza, Mirbehbahani Seyed Hamidreza, Khodagholi Fariba, Aliaghaei Abbas, Farahani Reza Mastery
Neurotoxicity Research 39(4) s. 1134-1147 DOI:10.1007/s12640-021-00354-w IF=3

Implantation of human olfactory ecto-mesenchymal stem cells restores locomotion in a rat model of Parkinson’s disease (2021) Farhadi Mohammad, Eskandarian Boroujeni Mahdi, Kamrava Seyed Kamran, Bagher Zohreh, Tehrani Ava Modirzadeh, Aghajanpour Fakhroddin, Ezi Samira, Soltani Reza, Khatmi Aysan, Alizadeh Rafieh
Journal of Chemical Neuroanatomy 114, 101961 DOI:10.1016/j.jchemneu.2021.101961 IF=2,4

Carbon dioxide inhibits COVID-19-type proinflammatory responses through extracellular signal-regulated kinases 1 and 2, novel carbon dioxide sensors (2021) Gałgańska Hanna, Jarmuszkiewicz Wiesława, Gałgański Łukasz
Cellular and Molecular Life Sciences 78, s. 8229–8242 DOI:10.1007/s00018-021-04005-3 IF=6,5

Nucleo-cytoplasmic shuttling of splicing factor SRSF1 is required for development and cilia function (2021) Haward Fiona, Masłoń Magdalena, Yeyati Patricia L, Bellora Nicolas, Hansen Jan N, Aitken Stuart, Lawson Jennifer, von Kriegsheim Alex, Wachten Dagmar, Mill Pleasantine, Adams Ian R, Caceres Javier F
eLife 10, e65104 DOI:10.7554/elife.65104 IF=7,1

Chronic Activation of AMPK Induces Mitochondrial Biogenesis through Differential Phosphorylation and Abundance of Mitochondrial Proteins in Dictyostelium discoideum (2021) Heidorn-Czarna Malgorzata, Heidorn Herbert-Michael, Fernando Sanjanie, Sanislav Oana, Jarmuszkiewicz Wiesława, Mutzel Rupert, Fisher Paul R.
International Journal of Molecular Sciences 22(21) 11675 DOI:10.3390/ijms222111675 IF=4,2

Cyclic mismatch binding ligands interact with disease-associated CGG trinucleotide repeats in RNA and suppress their translation (2021) Konieczny Patryk Radosław, Mukherjee Sanjukta, Stępniak-Konieczna Ewa Agnieszka, Taylor Katarzyna, Niewiadomska Daria, Piasecka Agnieszka, Walczak Agnieszka, Baud Anna Honorata, Dohno Chikara, Nakatani Kazuhiko, Sobczak Krzysztof
Nucleic Acids Research 49(16) s. 9479–9495 DOI:10.1093/nar/gkab669 IF=11,5

Local Duplication of TIR-NBS-LRR Gene Marks Clubroot Resistance in Brassica napus cv. Tosca (2021) Kopeć Piotr, Mikolajczyk Katarzyna, Jajor Ewa, Perek Agnieszka, Nowakowska-Małusecka Joanna, Obermeier Christian, Chawla Harmeet Singh, Korbas Marek, Bartkowiak-Broda Iwona, Karłowski Wojciech Maciej
Frontiers in Plant Science 12, 639631 DOI:10.3389/fpls.2021.639631 IF=4,4

Relationship between mitochondrial changes and seed aging as a limitation of viability for the storage of beech seed (Fagus sylvatica L.) (2021) Małecka Arleta Maria, Ciszewska Liliana Maria, Staszak Aleksandra, Ratajczak Ewelina
PeerJ 9, e10569 DOI:10.7717/peerj.10569 IF=2,4

Bacterial chaperone protein Hfq facilitates the annealing of sponge RNAs to small regulatory RNAs (2021) Małecka-Grajek Ewelina, Sobańska Daria, Olejniczak Mikołaj
Journal of Molecular Biology 433(23) 16729 DOI:10.1016/j.jmb.2021.167291 IF=4,8

Magnetic Targeting of Human Olfactory Mucosa Stem Cells Following Intranasal Administration: a Novel Approach to Parkinson’s Disease Treatment (2021) Simorgh Sara, Bagher Zohreh, Farhadi Mohammad, Kamrava Seyed Kamran, Eskandarian Boroujeni Mahdi, Namjoo Zeinab, Hour Farshid Qiyami, Moradi Salah, Alizadeh Rafieh
Molecular Neurobiology 58(8) s. 3835-3847 DOI:10.1007/s12035-021-02392-z IF=4,5

The tardigrade Hypsibius exemplaris has the active mitochondrial alternative oxidase that could be studied at animal organismal level (2021) Wojciechowska Daria, Roszkowska Milena, Kaczmarek Łukasz, Jarmuszkiewicz Wiesława, Karachitos Andonis, Kmita Hanna
PLoS ONE 16(8) e0244260 DOI:10.1371/journal.pone.0244260 IF=2,7

How can the commercial potential of microalgae from the Dunaliella genus be improved? The importance of nucleotide metabolism with a focus on nucleoside diphosphate kinase (NDPK (2021) Woyda-Płoszczyca Andrzej, Rybak Andrzej Stanisław
Algal Research-Biomass Biofuels and Bioproducts 60, 102474 DOI:10.1016/j.algal.2021.102474 IF=4

Pancreatic Differentiation of Stem Cells Reveals Pathogenesis of a Syndrome of Ketosis-Prone Diabetes (2021) Yang Diane, Patel Sanjeet, Szlachcic Wojciech, Chmielowiec Jolanta, Scaduto Diane, Putluri Nagireddy, Sreekumar Arun, Suliburk James, Metzker Michael, Balasubramanyam Ashok, Borowiak Małgorzata
Diabetes 70(10) s. 2419-2429 DOI:10.2337/db20-1293 IF=7,7

Natural variation identifies SNI1, the SMC5/6 component, as a modifier of meiotic crossover in Arabidopsis (2021) Zhu Longfei, Fernández-Jiménez Nadia, Szymańska-Lejman Maja, Pele Alexandre, Underwood Charles J., Serra Heidi, Lambing Christophe, Dłużewska Julia, Bieluszewski Tomasz, Pradillo Mónica, Henderson Ian R., Ziółkowski Piotr
Proceedings of the National Academy of Sciences of the United States of America 118 (33) e2021970118 DOI:10.1073/pnas.2021970118 IF=9,4

Taxonomy-aware, sequence similarity ranking reliably predicts phage–host relationships (2021) Zieleziński Andrzej, Barylski Jakub, Karłowski Wojciech Maciej
BMC Biology 19, 223 DOI:10.1186/s12915-021-01146-6 IF=6,7

DNAmoreDB, a database of DNAzymes (2021) Ponce-Salvatierra Almudena, Boccaletto Pietro, Bujnicki Janusz
Nucleic Acids Research 49(D1) s. D76–D81 DOI: 10.1093/nar/gkaa867 IF=11,5

Quantitative Analysis of Plant Primary Transcripts, (2021) Dolata Jakub, Zieleziński Andrzej, Stępień Agata Katarzyna, Kruszka Katarzyna, Bielewicz Dawid, Pacak Andrzej, Jarmołowski Artur, Karłowski Wojciech Maciej, Szweykowska-Kulińska Zofia
Methods in Molecular Biology 2170, s. 53-77 DOI:10.1007/978-1-0716-0743-5_5 IF=0

Rola kompleksu MutS oraz białka MSH2 w kontroli crossing-over u roślin, (2021) Dłużewska Julia, Ziółkowski Piotr
Postępy Biochemii 67(3) s. 287-293 DOI:10.18388/pb.2021_386 IF=1,7

Arabidopsis Spliceosome Factor SmD3 Modulates Immunity to Pseudomonas syringae Infection, (2021) Golisz Anna, Krzyszton Michal, Stepien Monika, Dolata Jakub, Piotrowska Justyna Jadwiga, Szweykowska-Kulińska Zofia, Jarmołowski Artur, Kufel Joanna
Frontiers in Plant Science, 12, 765003 DOI:10.3389/fpls.2021.765003 IF=6,6

Tolerance to Anhydrobiotic Conditions Among Two Coexisting Tardigrade Species Differing in Life Strategies, (2021) Roszkowska Milena, Gołdyn Bartłomiej, Wojciechowska Daria, Kosicki Jakub, Fiałkowska Edyta, Kmita Hanna, Kaczmarek Łukasz
Zoological Studies 60, 74 DOI:10.6620/ZS.2021.60-74 IF=1,9

Epitranscriptomics of Ischemic Heart Disease—The IHD-EPITRAN Study Design and Objectives, (2021) Sikorski Vilbert, Karjalainen Pasi, Blokhina Daria, Oksaharju Kati, Khan Jahangir, Katayama Shintaro, Rajala Helena, Suihko Satu, Tuohinen Suvi, Teittinen Kari, Nummi Annu, Nykänen Antti, Eskin Arda, Stark Christoffer, Biancari Fausto, Kiss Jan, Simpanen Jarmo, Ropponen Jussi, Lemström Karl, Savinainen Kimmo
International Journal of Molecular Sciences 22(12) 6630 DOI:10.3390/ijms22126630 IF=4,2

2020

Integrated proteomic and metabolomic analyses revealed molecular adjustments in Populus x canescens colonized with the ectomycorrhizal fungus Paxillus involutus, which limited plant host growth (2020) Szuba Agnieszka, Marczak Łukasz, Ratajczak Izabela, Kasprowicz-Maluśki Anna, Mucha Joanna
Environmental Microbiology 22( 9) s. 3754-3771 DOI:10.1111/1462-2920.15146 IF=4,9

Grafted human chorionic stem cells restore motor function and preclude cerebellar neurodegeneration in rat model of cerebellar ataxia (2020) Akhlaghpasand Mohammadhosein, Tizro Mahdi, Raoofi Amir, Meymand Arman Zeinaddini, Farhadieh Mohammaderfan, Khodagholi Fariba, Khatmi Aysan, Soltani Reza, Hoseini Yadolah, Jahanian Ali, Eskandarian Boroujeni Mahdi, Aliaghaei Abbas
Metabolic Brain Disease 35(4) s. 615-625 DOI:10.1007/s11011-020-00543-0 IF=2,7

Endocrine crosstalk between the gut microbiome and glial cells in development and disease (2020) Anbalagan Savani
Journal of Neuroendocrinology 33(5) e12924 DOI:10.1111/jne.12924 IF=2,9

SERRATE interacts with the nuclear exosome targeting (NEXT) complex to degrade primary miRNA precursors in Arabidopsis (2020) Bajczyk Mateusz, Lange Heike, Bielewicz Dawid, Szewc Łukasz, Bhat Susheel, Dolata Jakub, Kuhn Lauriane, Szweykowska-Kulińska Zofia, Gagliardi Dominique, Jarmołowski Artur
Nucleic Acids Research 48(12) s. 6839-6854 DOI:10.1093/nar/gkaa373 IF=11,5

Massive parallel sequencing in forensics: advantages, issues, technicalities, and prospects (2020) Ballard David, Winkler-Galicki Jakub, Wesoły Joanna Zofia
International Journal of Legal Medicine 134(4) s. 1291-1303 DOI:10.1007/s00414-020-02294-0 IF=2,2

TOXiTAXi: a web resource for toxicity of Bacillus thuringiensis protein compositions towards species of various taxonomic groups (2020) Baranek Jakub, Pogodziński Bartłomiej, Szipluk Norbert, Zieleziński Andrzej
Scientific Reports 10, 19767 DOI:10.1038/s41598-020-75932-7 IF=4,0

A Critical Insulin TCR Contact Residue Selects High-Affinity and Pathogenic Insulin-Specific T Cells (2020) Bettini Maria, Scavuzzo Marissa A., Liu Baoyu, Kolawole Elizabeth, Guo Lin, Evavold Brian , Borowiak Małgorzata, Bettini Matthew
Diabetes 69(3) s. 392-400 DOI:10.2337/db19-0821 IF=7,7

mRNA adenosine methylase (MTA) deposits m6A on pri-miRNAs to modulate miRNA biogenesis inArabidopsis thaliana (2020) Bhat Susheel, Bielewicz Dawid, Gulanicz Tomasz, Bodi Zsuzsanna, Yu Xiang, Anderson Stephen , Szewc Łukasz, Bajczyk Mateusz, Dolata Jakub, Grzelak Natalia, Smolinski Dariusz, Gregory Brian , Fray Rupert , Jarmołowski Artur, Szweykowska-Kulińska Zofia
Proceedings of the National Academy of Sciences of the United States of America 117(35) s. 21785-21795 DOI:10.1073/pnas.2003733117 IF=9,4

MSH2 shapes the meiotic crossover landscape in relation to interhomolog polymorphism in Arabidopsis (2020) Blackwell Alexander, Dłużewska Julia, Szymanska-Lejman Maja, Desjardins Stuart, Tock Andrew , Kbiri Nadia, Lambing Christophe, Lawrence Emma , Bieluszewski Tomasz, Rowan Beth, Higgins James , Ziółkowski Piotr, Henderson Ian
EMBO Journal 39, e104858 DOI:10.15252/embj.2020104858 IF=9,9

RNA polymerase II-binding aptamers in human ACRO1 satellites disrupt transcription in cis (2020) Boots Jennifer, von Pelchrzim Fredrike, Weiss Adam, Zimmermann Bob, Friesacher Theres , Radtke Maximilian , Żywicki Marek, Chen Doris, Matylla-Kulińska Katarzyna, Zagrovic Bojan, Schroeder Renée
Transcription 11(5) s. 217-229 DOI:10.1080/21541264.2020.1790990 IF=1,6

The Influence of Statins on the Aerobic Metabolism of Endothelial Cells (2020) Broniarek Izabela, Dominiak Karolina, Gałgański Łukasz, Jarmuszkiewicz Wiesława
International Journal of Molecular Sciences 21(4) 1485 DOI:10.3390/ijms21041485 IF=4,2

From dysregulated microRNAs to structural alterations in the striatal region of METH-injected rats (2020) Chavoshi Hossein, Eskandarian Boroujeni Mahdi, Abdollahifar Mohammad-Amin, Amini Abdollah , Tehrani Ava Modirzadeh, Moghaddam Meysam Hassani, Norozian Mohsen, Farahani Reza Mastery, Aliaghaei Abbas
Journal of Chemical Neuroanatomy 109, 101854 DOI:10.1016/j.jchemneu.2020.101854 IF=2,4

TaWAK6 encoding wall-associated kinase is involved in wheat resistance to leaf rust similar to adult plant resistance (2020) Dmochowska-Boguta Marta, Kloc Yuliya, Zieleziński Andrzej, Werecki Przemysław, Nadolska-Orczyk Anna, Karłowski Wojciech Maciej, Orczyk Wacław
PLoS ONE 15(1) e0227713 DOI:10.1371/journal.pone.0227713 IF=2,7

Exposure to methamphetamine exacerbates motor activities and alters circular RNA profile of cerebellum (2020) Eskandarian Boroujeni Mahdi, Nasrollahi Amin, Boroujeni Puria Baghbani, Fadaeifathabadi Fatemeh, Farhadieh Mohammaderfan, Tehrani Ava Modirzadeh , Nakhaei Hosein, Sajedian Amir Masoud, Peirouvi Tahmineh, Aliaghaei Abbas
Journal of Pharmacological Sciences 144(1) s. 1-8 DOI:10.1016/j.jphs.2020.05.010 IF=2,8

Determinants of RNA recognition by the FinO domain of the Escherichia coli ProQ protein (2020) Stein Ewa, Kwiatkowska Joanna, Basczok Maciej, Gravel Chandra, Berry Katherine, Olejniczak Mikołaj
Nucleic Acids Research 48(13) s. 7502-7519 DOI:10.1093/nar/gkaa497 IF=11,5

CaverDock: A Novel Method for the Fast Analysis of Ligand Transport (2020) Filipovic Jiri, Vavra Ondrej, Plhak Jan, Bednar David, Marques Sergio , Brezovsky Jan, Matyska Ludek, Damborsky Jiri
IEEE-ACM Transactions on Computational Biology and Bioinformatics 17(5) s. 1625-1638 DOI:10.1109/TCBB.2019.2907492 IF=3,0

Muscleblind-like 2 controls the hypoxia response of cancer cells (2020) Fischer Sandra, Di Liddo Antonella, Taylor Katarzyna, Gerhardus Jamina , Sobczak Krzysztof, Zarnack Kathi, Weigand Julia
RNA 26(5) s. 648-663 DOI:10.1261/rna.073353.119 IF=4,3

Methamphetamine administration impairs behavior, memory and underlying signaling pathways in the hippocampus (2020) Golsorkhdan Sakineh Alizadeh, Eskandarian Boroujeni Mahdi, Aliaghaei Abbas, Abdollahifar Mohammad Amin, Ramezanpour Afshar, Nejatbakhsh Reza, Anarkooli Iraj Jafar, Barfi Elahe, Fridoni Mohammad Javad
Behavioural Brain Research 379, 112300 DOI:10.1016/j.bbr.2019.112300 IF=3,0

Barley microRNAs as metabolic sensors for soil nitrogen availability (2020) Grabowska Aleksandra, Smoczyńska Aleksandra, Bielewicz Dawid, Pacak Andrzej, Jarmołowski Artur, Szweykowska-Kulińska Zofia
Plant Science 299, 110608 DOI:10.1016/j.plantsci.2020.110608 IF=3,6

High diversity in the Pseudechiniscus suillus-facettalis complex (Heterotardigrada: Echiniscidae) with remarks on the morphology of the genus Pseudechiniscus (2020) Grobys Daria, Roszkowska Milena, Gawlak Magdalena, Kmita Hanna, Kepel Andrzej, Kepel Marta, Parnikoza Ivan, Bartylak Tomasz, Kaczmarek Łukasz
Zoological Journal of the Linnean Society 188(3) s. 733-752 DOI:10.1093/zoolinnean/zlz171 IF=2,8

Aspirin and its pleiotropic application (2020) Hybiak Jolanta, Broniarek Izabela, Kiryczyński Gerard, Los Laura, Rosik Jakub, Machaj Filip, Sławiński Hubert, Jankowska Kornelia, Urasińska Elżbieta
European Journal of Pharmacology 866, 172762 DOI:10.1016/j.ejphar.2019.172762 IF=3,3

Reprogramming and transdifferentiation – two key processes for regenerative medicine (2020) Hybiak Jolanta, Jankowska Kornelia, Machaj Filip, Rosik Jakub, Broniarek Izabela, Żyluk Andrzej, Hilderman Gordon , Małecki Andrzej, Łos Marek, Urasińska Elżbieta
European Journal of Pharmacology 882, 173202 DOI:10.1016/j.ejphar.2020.173202 IF=3,3

Core spliceosomal Sm proteins as constituents of cytoplasmic mRNPs in plants (2020) Hyjek-Składanowska Malwina, Bajczyk Mateusz, Gołębiewski Marcin, Nuc Przemysław, Kołowerzo-Lubnau Agnieszka, Jarmołowski Artur, Smoliński Aleksander
Plant Journal 103(3) s. 1155-1173 DOI:10.1111/tpj.14792 IF=6,1

A combined structural and biochemical approach reveals translocation and stalling of UvrB on the DNA lesion as a mechanism of damage verification in bacterial nucleotide excision repair (2020) Jaciuk Marcin, Swuec Paolo, Gaur Vineet, Kasprzak Joanna, Renault Ludovic, Dobrychłop Mateusz, Nirwal Shivlee, Bujnicki Janusz Marek, Costa Alessandro, Nowotny Marcin
DNA Repair 85, 102746 DOI:10.1016/j.dnarep.2019.102746 IF=3,3

Identification of Novel Inhibitors of a Plant Group A Protein Phosphatase Type 2C Using a Combined In Silico and Biochemical Approach (2020) Janicki Maciej, Marczak Małgorzata, Cieśla Agata, Ludwików Agnieszka
Frontiers in Plant Science 11, 526460 DOI:10.3389/fpls.2020.526460 IF=4,4

Lung mitochondria adaptation to endurance training in rats (2020) Jarmuszkiewicz Wiesława, Dominiak Karolina, Gałgański Łukasz, Gałgańska Hanna, Kicińska Anna Małgorzata, Majerczak Joanna, Zoladz Jerzy
Free Radical Biology and Medicine 161, s. 163-174 DOI:10.1016/j.freeradbiomed.2020.10.011 IF=6,2

Integrative description of bisexual Paramacrobiotus experimentalis sp. nov. (Macrobiotidae) from republic of Madagascar (Africa) with microbiome analysis (2020) Kaczmarek Łukasz, Roszkowska Milena, Poprawa Izabela, Janelt Kamil, Kmita Hanna, Gawlak Magdalena, Fiałkowska Edyta, Mioduchowska Monika
Molecular Phylogenetics and Evolution 145, 106730 DOI:10.1016/j.ympev.2019.106730 IF=3,5

Lipid Stores and Lipid Metabolism Associated Gene Expression in Porcine and Bovine Parthenogenetic Embryos Revealed by Fluorescent Staining and RNA-seq (2020) Kajdasz Arkadiusz, Warzych Ewelina, Derebecka Natalia, Madeja Zofia , Lechniak Dorota, Wesoły Joanna Zofia, Pawlak Piotr
International Journal of Molecular Sciences 21(18) 6488 DOI:10.3390/ijms21186488 IF=4,2

Flavonoids and mitochondria: Activation of cytoprotective pathways? (2020) Kicińska Anna Małgorzata, Jarmuszkiewicz Wiesława
Molecules 25(13) 3060 DOI:10.3390/molecules25133060 IF=3,1

Regulation of the mitochondrial BKCa channel by the citrus flavonoid naringenin as a potential means of preventing cell damage (2020) Kicińska Anna Małgorzata, Kampa Rafał, Daniluk Jan, Sęk Aleksandra, Jarmuszkiewicz Wiesława, Szewczyk Adam, Bednarczyk Piotr
Molecules 25(13) 3010 DOI:10.3390/molecules25133010 IF=3,1

Silencing of HvGSK1.1-A GSK3/SHAGGY-Like Kinase-Enhances Barley (Hordeum vulgare L.) Growth in Normal and in Salt Stress Conditions (2020) Kloc Yuliya, Dmochowska-Boguta Marta, Zieleziński Andrzej, Nadolska-Orczyk Anna, Karłowski Wojciech Maciej, Orczyk Waclaw
International Journal of Molecular Sciences 21(18) 6616 DOI:10.3390/ijms21186616 IF=4,2

Combined use of companion planting and PGPR for the assisted phytoextraction of trace metals (Zn, Pb, Cd) (2020) Konkolewska Agnieszka, Piechalak Aneta, Ciszewska Liliana Maria, Antos-Krzemińska Nina Magdalena, Skrzypczak Tomasz, Hanć Anetta, Sitko Krzysztof, Małkowski Eugeniusz, Barałkiewicz Danuta, Małecka Arleta Maria
Environmental Science and Pollution Research 27(12) s. 13809-13825 DOI:10.1007/s11356-020-07885-3 IF=3,1

Molluscan aquaporins: an overview, with some notes on their role in the entry into aestivation in gastropods (2020) Kosicka Ewa Maria, Lesicki Andrzej, Pieńkowska Joanna Romana
Molluscan Research 40(2) s. 101-111 DOI:10.1080/13235818.2020.1716442 IF=0,9

ESR Method in Monitoring of Nanoparticle Endocytosis in Cancer Cells (2020) Krzyminiewski Ryszard, Dobosz Bernadeta, Krist Bart, Schroeder Grzegorz Marek, Kurczewska Joanna, Bluyssen Hans A.R.
International Journal of Molecular Sciences 21(12) 4388 DOI:10.3390/ijms21124388 IF=4,2

Human NK cell deficiency as a result of biallelic mutations in MCM10 (2020) Mace Emily , Paust Silke, Conte Matilde , Baxley Ryan , Schmit Megan , Patil Sagar , Guilz Nicole , Mukherjee Malini, Pezzi Ashley , Chmielowiec Jolanta, Tatineni Swetha, Chinn Ivan , Akdemir Zeynep Coban, Jhangiani Shalini , Muzny Donna , Stray-Pedersen Asbjorg, Bradley Rachel , Moody Mo, Connor Philip , Heaps Adrian , Steward Colin, Banerjee Pinaki , Gibbs Richard , Borowiak Małgorzata, Lupski James , Jolles Stephen, Bielinsky Anja , Orange Jordan
Journal of Clinical Investigation 130(10) s. 5272-5286 DOI:10.1172/jci134966 IF=11,9

Identification of structural variants in two novel genomes of maize inbred lines possibly related to glyphosate tolerance (2020) Mahmoud Medhat , Gracz-Bernaciak Joanna, Żywicki Marek, Karłowski Wojciech Maciej, Twardowski Tomasz, Tyczewska Agata
Plants 9(4) 523 DOI:10.3390/plants9040523 IF=2,6

New evidence on the relationships between Hypnophila Bourguignat, 1859 and Gomphroa Westerlund, 1902 (Gastropoda: Eupulmonata: Azecidae) (2020) Manganelli Giuseppe, Pieńkowska Joanna Romana, Kosicka Ewa Maria, Barbato Debora, Benocci Andrea, Lesicki Andrzej, Giusti Folco
Folia Malacologica 28(4) s. 286-294 DOI:10.12657/folmal.028.023 IF=0,0

Protein Phosphatases Type 2C Group A Interact with and Regulate the Stability of ACC Synthase 7 in Arabidopsis (2020) Marczak Małgorzata, Cieśla Agata, Janicki Maciej, Kasprowicz-Maluśki Anna, Kubiak Piotr, Ludwików Agnieszka
Cells 9(4) 978 DOI:10.3390/cells9040978 IF=4,8

Allies or enemies: The role of reactive oxygen species in developmental processes of black cottonwood (populus trichocarpa) (2020) Marzec-Schmidt Katarzyna Maria, Wojciechowska Natalia, Nemeczek Klaudia, Ludwików Agnieszka, Mucha Joanna, Bagniewska-Zadworna Agnieszka Maria
Antioxidants 9(3) 199 DOI:10.3390/antiox9030199 IF=4,5

Chronic administration of methylphenidate did not affect memory and GDNF levels but increase astrogliosis in adult male rat’s hippocampus (2020) Meftahi Gholam Hossein, Moafi Maral, Mirbehbahani Syed Hamidreza, Fotouhi Farid, Toreyhi Hossein, Ezi Samira, Aghajanpour Fakhroddin, Forouzannia Ali, Eskandarian Boroujeni Mahdi, Peirouvi Tahmineh, Abbaszadeh Hojjat Allah, Aliaghaei Abbas
Journal of Chemical Neuroanatomy 108, 101818 DOI:10.1016/j.jchemneu.2020.101818 IF=2,4

Perceptual mechanisms of social affiliation in zebrafish (2020) Nunes Ana Rita, Carreira Leonor, Anbalagan Savani, Blechman Janna, Levkowitz Gil, Oliveira Rui
Scientific Reports 10, 3642 DOI:10.1038/s41598-020-60154-8 IF=4,0

Redescription of Monacha pantanellii (De Stefani, 1879), a species endemic to the central Apennines, Italy (Gastropoda, Eupulmonata, Hygromiidae) by an integrative molecular and morphological approach (2020) Pieńkowska Joanna Romana, Manganelli Giuseppe, Giusti Folco, Barbato Debora, Kosicka Ewa Maria, Hallgass Alessandro, Lesicki Andrzej
Zookeys 988 s. 17-61 DOI:10.3897/zookeys.988.56397 IF=1,1

Identification of candidate genes and regulatory factors related to growth rate through hypothalamus transcriptome analyses in broiler chickens (2020) Piórkowska Katarzyna, Żukowski Kacper, Połtowicz Katarzyna, Nowak Joanna, Ropka-Molik Katarzyna, Derebecka Natalia, Wesoły Joanna Zofia, Wojtysiak Dorota
BMC Genomics 21, 509 DOI:10.1186/s12864-020-06884-5 IF=3,6

Aberrant Activity of Histone-Lysine N-Methyltransferase 2 (KMT2) Complexes in Oncogenesis (2020) Poręba Elżbieta, Leśniewicz Krzysztof, Durzyńska Julia Łucja
International Journal of Molecular Sciences 21(24) 9340 DOI:10.3390/ijms21249340 IF=4,2

Identification of Molecular Mechanisms Related to Pig Fatness at the Transcriptome and miRNAome Levels (2020) Ropka-Molik Katarzyna, Pawlina-Tyszko Klaudia, Żukowski Kacper, Tyra Mirosław, Derebecka Natalia, Wesoły Joanna Zofia, Szmatoła Tomasz, Piórkowska Katarzyna
Genes 11(6) 600 DOI:10.3390/genes11060600 IF=3,3

Integrative description of five Pseudechiniscus species (Heterotardigrada: Echiniscidae: The Suillus-Facettalis complex) (2020) Roszkowska Milena, Grobys Daria, Bartylak Tomasz, Gawlak Magdalena, Kmita Hanna, Kepel Andrzej, Kepel Marta, Parnikoza Ivan, Kaczmarek Łukasz
Zootaxa 4763(4) s. 451-484 DOI:10.11646/zootaxa.4763.4.1 IF=1,0

Long-term anhydrobiosis in two taxa of moss dwelling Eutardigrada (Tardigrada) desiccated for 12 and 15 years, respectively (2020) Roszkowska Milena, Kmita Hanna, Kaczmarek Łukasz
European Zoological Journal 87(1) s. 642-647 DOI:10.1080/24750263.2020.1829110 IF=1,7

Identification of transcription factors that bind to the 5′-UTR of the barley PHO2 gene (2020) Sega Paweł, Kruszka Katarzyna, Szewc Łukasz, Szweykowska-Kulińska Zofia, Pacak Andrzej
Plant Molecular Biology 102(1-2) s. 73-88 DOI:10.1007/s11103-019-00932-9 IF=3,3

The identification of differentially expressed genes in male and female gametophytes of simple thalloid liverwort Pellia endiviifolia sp. B using an RNA-seq approach (2020) Sierocka Izabela, Alaba Sylwia, Jarmołowski Artur, Karłowski Wojciech Maciej, Szweykowska-Kulińska Zofia
Planta 252, 21 DOI:10.1007/s00425-020-03424-z IF=3,4

A functional network of novel barley microRNAs and their targets in response to drought (2020) Smoczyńska Aleksandra, Pacak Andrzej, Nuc Przemysław, Świda-Barteczka Aleksandra Kinga, Kruszka Katarzyna, Karłowski Wojciech Maciej, Jarmołowski Artur, Szweykowska-Kulińska Zofia
Genes 11(5) 488 DOI:10.3390/genes11050488 IF=3,3

Tramadol exposure upregulated apoptosis, inflammation and autophagy in PC12 cells and rat’s striatum: An in vitro- in vivo approach (2020) Soltani Reza, Eskandarian Boroujeni Mahdi, Aghajanpour Fakhrrodin, Khatmi Aysan, Ezi Samira, Mirbehbahani Seyed Hamidreza, Abdollahifar Mohammad-Amin, Akhlaghpasand Mohamadhosein, Aliaghaei Abbas, Heidari Mohammad-Hasan
Journal of Chemical Neuroanatomy 109, 101820 DOI:10.1016/j.jchemneu.2020.101820 IF=2,4

Differences in stress defence mechanisms in germinating seeds of Pinus sylvestris exposed to various lead chemical forms (2020) Staszak-Piekarska Agata Elżbieta, Małecka Arleta Maria, Ciereszko Iwona, Ratajczak Ewelina
PLoS ONE 15(9) e0238448 DOI:10.1371/journal.pone.0238448 IF=2,7

AON-induced splice-switching and DMPK pre-mRNA degradation as potential therapeutic approaches for Myotonic Dystrophy type 1 (2020) Stępniak-Konieczna Ewa Agnieszka, Konieczny Patryk Radosław, Cywoniuk Piotr, Dłużewska Julia, Sobczak Krzysztof
Nucleic Acids Research 48(5) s. 2531-2543 DOI:10.1093/nar/gkaa007 IF=11,5

Dynamics, a powerful component of current and future in silico approaches for protein design and engineering (2020) Surpeta Bartłomiej, Sequeiros-Borja Carlos Eduardo, Brezovsky Jan
International Journal of Molecular Sciences 21(8) 2713 DOI:10.3390/ijms21082713 IF=4,2

Loss of MBNL1 induces RNA misprocessing in the thymus and peripheral blood (2020) Sznajder Łukasz, Scotti Marina, Shin Jihae, Taylor Katarzyna, Ivankovic Franjo, Nutter Curtis, Aslam Faaiq, Subramony Sam, Ranum Laura, Swanson Maurice
Nature Communications 11, 2022 DOI:10.1038/s41467-020-15962-x IF=12,1

Intrinsic regulatory role of RNA structural arrangement in alternative splicing control (2020) Taylor Katarzyna, Sobczak Krzysztof
International Journal of Molecular Sciences 21(14) 5161 DOI:10.3390/ijms21145161 IF=4,2

Ultrastructural visualization of 3D chromatin folding using volume electron microscopy and DNA in situ hybridization (2020) Trzaskoma Paweł, Ruszczycki Błażej, Lee Byoungkoo, Pels Katarzyna, Krawczyk Katarzyna, Bokota Grzegorz, Szczepankiewicz Andrzej, Aaro Jesse, Walczak Agnieszka, Śliwińska Małgorzata, Magalska Adriana, Kadlof Michal, Wolny Artur, Parteka Zofia, Arabasz Sebastian, Kiss-Arabasz Magdalena,Plewczyński Dariusz, Ruan Yijun, Wilczyński Grzegorz
Nature Communications 11, 2120 DOI:10.1038/s41467-020-15987-2 IF=12,1

Is Polymorphism in the Apoptosis and Inflammatory Pathway Genes Associated With a Primary Response to Anti-TNF Therapy in Crohn’s Disease Patients? (2020) Walczak Michal, Lykowska-Szuber Liliana, Plucinska Marianna, Stawczyk-Eder Kamila, Zakerska-Banaszak Oliwia, Eder Piotr, Krela-Kazmierczak Iwona, Michalak Michał, Żywicki Marek, Karłowski Wojciech Maciej, Szalata Marlena, Dobrowolska Agnieszka, Słomski Ryszard, Skrzypczak-Zielinska Marzena
Frontiers in Pharmacology 11, 01207 DOI:10.3389/fphar.2020.01207 IF=4,2

RNAProbe: a web server for normalization and analysis of RNA structure probing data (2020) Wirecki Tomasz, Merdas Katarzyna, Bernat Agata, Boniecki Michał, Bujnicki Janusz Marek, Stefaniak Filip:
Nucleic Acids Research 48( W1) s. 292-299 DOI:10.1093/nar/gkaa396 IF=11,5

Seasonal senescence of leaves and roots of Populus trichocarpa—is the scenario the same or different? (2020) Wojciechowska Natalia, Marzec-Schmidt Katarzyna Maria, Kalemba Ewa, Ludwików Agnieszka, Bagniewska-Zadworna Agnieszka Maria
Tree Physiology 40(8) s. 987-1000 DOI:10.1093/treephys/tpaa019 IF=3,7

Abscisic Acid and Jasmonate Metabolisms Are Jointly Regulated During Senescence in Roots and Leaves of Populus trichocarpa (2020) Wojciechowska Natalia, Wilmowicz Emilia, Marzec-Schmidt Katarzyna Maria, Ludwików Agnieszka, Bagniewska-Zadworna Agnieszka Maria
International Journal of Molecular Sciences 21(6) 2042 DOI:10.3390/ijms21062042 IF=4,2

Polymeric carriers for delivery systems in the treatment of chronic periodontal disease (2020) Zieba Magdalena, Chaber Paweł, Duale Khadar, Maksymiak Magdalena, Basczok Maciej, Kowalczuk Marek, Adamus Grażyna
Polymers 12(7) 1574 DOI:10.3390/polym12071574 IF=2,9